Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Suds3Q8BR65 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Suds3Q8BR65 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Suds3Q8BR65 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Suds3Q8BR65 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Suds3Q8BR65 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Suds3Q8BR65 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Suds3Q8BR65 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.2■□□□□ 0.66
Suds3Q8BR65 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Suds3Q8BR65 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Suds3Q8BR65 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Suds3Q8BR65 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Suds3Q8BR65 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Suds3Q8BR65 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.19■□□□□ 0.66
Suds3Q8BR65 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Suds3Q8BR65 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Suds3Q8BR65 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Suds3Q8BR65 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Suds3Q8BR65 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.19■□□□□ 0.66
Suds3Q8BR65 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.19■□□□□ 0.66
Suds3Q8BR65 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.19■□□□□ 0.66
Suds3Q8BR65 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Suds3Q8BR65 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.19■□□□□ 0.66
Suds3Q8BR65 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.19■□□□□ 0.66
Suds3Q8BR65 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.19■□□□□ 0.66
Suds3Q8BR65 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.19■□□□□ 0.66
Suds3Q8BR65 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Suds3Q8BR65 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Suds3Q8BR65 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.19■□□□□ 0.66
Suds3Q8BR65 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Suds3Q8BR65 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Suds3Q8BR65 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Suds3Q8BR65 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Suds3Q8BR65 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Suds3Q8BR65 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Suds3Q8BR65 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.18■□□□□ 0.66
Suds3Q8BR65 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Suds3Q8BR65 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Suds3Q8BR65 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Suds3Q8BR65 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Suds3Q8BR65 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Suds3Q8BR65 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Suds3Q8BR65 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.18■□□□□ 0.66
Suds3Q8BR65 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
Suds3Q8BR65 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.18■□□□□ 0.66
Suds3Q8BR65 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.18■□□□□ 0.66
Suds3Q8BR65 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.18■□□□□ 0.66
Suds3Q8BR65 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Suds3Q8BR65 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Suds3Q8BR65 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Suds3Q8BR65 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Suds3Q8BR65 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Suds3Q8BR65 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Suds3Q8BR65 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Suds3Q8BR65 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Suds3Q8BR65 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Suds3Q8BR65 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Suds3Q8BR65 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Suds3Q8BR65 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Suds3Q8BR65 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Suds3Q8BR65 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Suds3Q8BR65 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Suds3Q8BR65 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Gm9988-201ENSMUST00000069786 435 ntBASIC19.16■□□□□ 0.66
Suds3Q8BR65 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Gm10493-201ENSMUST00000097270 612 ntBASIC19.16■□□□□ 0.66
Suds3Q8BR65 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Suds3Q8BR65 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms