Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smco3Q8BQM7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.52■□□□□ 0.08
Smco3Q8BQM7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smco3Q8BQM7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smco3Q8BQM7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smco3Q8BQM7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.52■□□□□ 0.08
Smco3Q8BQM7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.52■□□□□ 0.08
Smco3Q8BQM7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smco3Q8BQM7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smco3Q8BQM7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Smco3Q8BQM7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.52■□□□□ 0.07
Smco3Q8BQM7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smco3Q8BQM7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smco3Q8BQM7 Rarb-207ENSMUST00000225921 2756 ntBASIC15.52■□□□□ 0.07
Smco3Q8BQM7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smco3Q8BQM7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smco3Q8BQM7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smco3Q8BQM7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Smco3Q8BQM7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Gm10232-201ENSMUST00000089221 720 ntBASIC15.49■□□□□ 0.07
Smco3Q8BQM7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smco3Q8BQM7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smco3Q8BQM7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.47■□□□□ 0.07
Smco3Q8BQM7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Smco3Q8BQM7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smco3Q8BQM7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smco3Q8BQM7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms