Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap4Q8BMK4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap4Q8BMK4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.76■□□□□ 0.43
Ckap4Q8BMK4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap4Q8BMK4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ckap4Q8BMK4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap4Q8BMK4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ckap4Q8BMK4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.76■□□□□ 0.43
Ckap4Q8BMK4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.76■□□□□ 0.43
Ckap4Q8BMK4 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.76■□□□□ 0.43
Ckap4Q8BMK4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap4Q8BMK4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap4Q8BMK4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap4Q8BMK4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Ckap4Q8BMK4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap4Q8BMK4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap4Q8BMK4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ckap4Q8BMK4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ckap4Q8BMK4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap4Q8BMK4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Ckap4Q8BMK4 Mir7075-201ENSMUST00000184187 82 ntBASIC17.75■□□□□ 0.43
Ckap4Q8BMK4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap4Q8BMK4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap4Q8BMK4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap4Q8BMK4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap4Q8BMK4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Gm27454-201ENSMUST00000185090 204 ntBASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap4Q8BMK4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap4Q8BMK4 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ckap4Q8BMK4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap4Q8BMK4 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.71■□□□□ 0.43
Ckap4Q8BMK4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap4Q8BMK4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap4Q8BMK4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap4Q8BMK4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap4Q8BMK4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap4Q8BMK4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap4Q8BMK4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap4Q8BMK4 Gm8493-201ENSMUST00000196881 489 ntBASIC17.71■□□□□ 0.43
Ckap4Q8BMK4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ckap4Q8BMK4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ckap4Q8BMK4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms