Protein–RNA interactions for Protein: Q8BMI4

Gen1, Flap endonuclease GEN homolog 1, mousemouse

Predictions only

Length 908 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gen1Q8BMI4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gen1Q8BMI4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Gen1Q8BMI4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gen1Q8BMI4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gen1Q8BMI4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gen1Q8BMI4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gen1Q8BMI4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gen1Q8BMI4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Gen1Q8BMI4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gen1Q8BMI4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Gen1Q8BMI4 BC021767-201ENSMUST00000126387 1716 ntBASIC17.59■□□□□ 0.41
Gen1Q8BMI4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gen1Q8BMI4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gen1Q8BMI4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.59■□□□□ 0.41
Gen1Q8BMI4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gen1Q8BMI4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gen1Q8BMI4 Gm40848-201ENSMUST00000221998 324 ntBASIC17.59■□□□□ 0.41
Gen1Q8BMI4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gen1Q8BMI4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gen1Q8BMI4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gen1Q8BMI4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gen1Q8BMI4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Gen1Q8BMI4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gen1Q8BMI4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gen1Q8BMI4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 Gm18284-201ENSMUST00000172604 624 ntBASIC17.58■□□□□ 0.4
Gen1Q8BMI4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Gen1Q8BMI4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
Gen1Q8BMI4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gen1Q8BMI4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gen1Q8BMI4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.57■□□□□ 0.4
Gen1Q8BMI4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gen1Q8BMI4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Gen1Q8BMI4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.57■□□□□ 0.4
Gen1Q8BMI4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Gen1Q8BMI4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gen1Q8BMI4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gen1Q8BMI4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gen1Q8BMI4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gen1Q8BMI4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gen1Q8BMI4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Gen1Q8BMI4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Gm8495-201ENSMUST00000188740 694 ntBASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.56■□□□□ 0.4
Gen1Q8BMI4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gen1Q8BMI4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.55■□□□□ 0.4
Gen1Q8BMI4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Gen1Q8BMI4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gen1Q8BMI4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gen1Q8BMI4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gen1Q8BMI4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gen1Q8BMI4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Gen1Q8BMI4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.55■□□□□ 0.4
Gen1Q8BMI4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.55■□□□□ 0.4
Gen1Q8BMI4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.55■□□□□ 0.4
Gen1Q8BMI4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gen1Q8BMI4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms