Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne4Q8BLR2 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.81■□□□□ 0.28
Cpne4Q8BLR2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne4Q8BLR2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cpne4Q8BLR2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cpne4Q8BLR2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Cpne4Q8BLR2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpne4Q8BLR2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cpne4Q8BLR2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.79■□□□□ 0.28
Cpne4Q8BLR2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpne4Q8BLR2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpne4Q8BLR2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cpne4Q8BLR2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpne4Q8BLR2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cpne4Q8BLR2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpne4Q8BLR2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Cpne4Q8BLR2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.78■□□□□ 0.28
Cpne4Q8BLR2 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.77■□□□□ 0.28
Cpne4Q8BLR2 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.77■□□□□ 0.28
Cpne4Q8BLR2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cpne4Q8BLR2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpne4Q8BLR2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cpne4Q8BLR2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cpne4Q8BLR2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cpne4Q8BLR2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cpne4Q8BLR2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpne4Q8BLR2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpne4Q8BLR2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cpne4Q8BLR2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.77■□□□□ 0.28
Cpne4Q8BLR2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpne4Q8BLR2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpne4Q8BLR2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Gm37179-201ENSMUST00000194862 823 ntBASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.76■□□□□ 0.27
Cpne4Q8BLR2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cpne4Q8BLR2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpne4Q8BLR2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cpne4Q8BLR2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.75■□□□□ 0.27
Cpne4Q8BLR2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpne4Q8BLR2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cpne4Q8BLR2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.75■□□□□ 0.27
Cpne4Q8BLR2 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.75■□□□□ 0.27
Cpne4Q8BLR2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpne4Q8BLR2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpne4Q8BLR2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cpne4Q8BLR2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cpne4Q8BLR2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cpne4Q8BLR2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Cpne4Q8BLR2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms