Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tdp1Q8BJ37 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tdp1Q8BJ37 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tdp1Q8BJ37 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Tdp1Q8BJ37 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tdp1Q8BJ37 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.85■□□□□ 0.93
Tdp1Q8BJ37 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tdp1Q8BJ37 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tdp1Q8BJ37 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Tdp1Q8BJ37 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tdp1Q8BJ37 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tdp1Q8BJ37 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.84■□□□□ 0.93
Tdp1Q8BJ37 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tdp1Q8BJ37 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tdp1Q8BJ37 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.84■□□□□ 0.93
Tdp1Q8BJ37 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.84■□□□□ 0.93
Tdp1Q8BJ37 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.84■□□□□ 0.93
Tdp1Q8BJ37 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tdp1Q8BJ37 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tdp1Q8BJ37 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tdp1Q8BJ37 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tdp1Q8BJ37 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tdp1Q8BJ37 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.83■□□□□ 0.93
Tdp1Q8BJ37 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tdp1Q8BJ37 Gm2399-201ENSMUST00000104944 225 ntBASIC20.83■□□□□ 0.93
Tdp1Q8BJ37 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.83■□□□□ 0.93
Tdp1Q8BJ37 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.83■□□□□ 0.93
Tdp1Q8BJ37 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tdp1Q8BJ37 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Tdp1Q8BJ37 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tdp1Q8BJ37 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.83■□□□□ 0.92
Tdp1Q8BJ37 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tdp1Q8BJ37 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Tdp1Q8BJ37 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tdp1Q8BJ37 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tdp1Q8BJ37 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.82■□□□□ 0.92
Tdp1Q8BJ37 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tdp1Q8BJ37 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tdp1Q8BJ37 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tdp1Q8BJ37 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tdp1Q8BJ37 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.82■□□□□ 0.92
Tdp1Q8BJ37 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tdp1Q8BJ37 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.81■□□□□ 0.92
Tdp1Q8BJ37 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
Tdp1Q8BJ37 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tdp1Q8BJ37 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.81■□□□□ 0.92
Tdp1Q8BJ37 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tdp1Q8BJ37 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tdp1Q8BJ37 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.81■□□□□ 0.92
Tdp1Q8BJ37 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tdp1Q8BJ37 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tdp1Q8BJ37 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tdp1Q8BJ37 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tdp1Q8BJ37 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 Gm10698-201ENSMUST00000182663 604 ntBASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tdp1Q8BJ37 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.78■□□□□ 0.92
Tdp1Q8BJ37 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tdp1Q8BJ37 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tdp1Q8BJ37 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Tdp1Q8BJ37 Gm6576-201ENSMUST00000169678 883 ntBASIC20.78■□□□□ 0.92
Tdp1Q8BJ37 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.78■□□□□ 0.92
Tdp1Q8BJ37 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.78■□□□□ 0.92
Tdp1Q8BJ37 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tdp1Q8BJ37 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tdp1Q8BJ37 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tdp1Q8BJ37 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tdp1Q8BJ37 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tdp1Q8BJ37 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tdp1Q8BJ37 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.77■□□□□ 0.92
Tdp1Q8BJ37 Gm18666-201ENSMUST00000190039 958 ntBASIC20.77■□□□□ 0.92
Tdp1Q8BJ37 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.77■□□□□ 0.92
Tdp1Q8BJ37 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms