Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf38Q8BI21 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rnf38Q8BI21 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf38Q8BI21 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf38Q8BI21 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf38Q8BI21 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf38Q8BI21 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf38Q8BI21 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rnf38Q8BI21 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.13■□□□□ 0.49
Rnf38Q8BI21 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.13■□□□□ 0.49
Rnf38Q8BI21 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf38Q8BI21 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf38Q8BI21 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf38Q8BI21 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.13■□□□□ 0.49
Rnf38Q8BI21 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
Rnf38Q8BI21 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf38Q8BI21 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf38Q8BI21 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rnf38Q8BI21 Gm15039-201ENSMUST00000118914 875 ntBASIC18.12■□□□□ 0.49
Rnf38Q8BI21 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.12■□□□□ 0.49
Rnf38Q8BI21 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rnf38Q8BI21 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf38Q8BI21 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rnf38Q8BI21 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.12■□□□□ 0.49
Rnf38Q8BI21 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf38Q8BI21 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf38Q8BI21 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf38Q8BI21 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf38Q8BI21 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf38Q8BI21 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf38Q8BI21 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Gm27454-201ENSMUST00000185090 204 ntBASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rnf38Q8BI21 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.09■□□□□ 0.49
Rnf38Q8BI21 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf38Q8BI21 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rnf38Q8BI21 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rnf38Q8BI21 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.09■□□□□ 0.49
Rnf38Q8BI21 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf38Q8BI21 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.09■□□□□ 0.49
Rnf38Q8BI21 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf38Q8BI21 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf38Q8BI21 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf38Q8BI21 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf38Q8BI21 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.08■□□□□ 0.49
Rnf38Q8BI21 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Rnf38Q8BI21 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf38Q8BI21 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.08■□□□□ 0.48
Rnf38Q8BI21 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf38Q8BI21 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rnf38Q8BI21 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.08■□□□□ 0.48
Rnf38Q8BI21 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf38Q8BI21 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rnf38Q8BI21 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rnf38Q8BI21 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf38Q8BI21 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms