Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Clrn3Q8BHH8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn3Q8BHH8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn3Q8BHH8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn3Q8BHH8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn3Q8BHH8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.59■□□□□ 0.41
Clrn3Q8BHH8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn3Q8BHH8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn3Q8BHH8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn3Q8BHH8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn3Q8BHH8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Clrn3Q8BHH8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn3Q8BHH8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clrn3Q8BHH8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Clrn3Q8BHH8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Clrn3Q8BHH8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clrn3Q8BHH8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clrn3Q8BHH8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Clrn3Q8BHH8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn3Q8BHH8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.58■□□□□ 0.4
Clrn3Q8BHH8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn3Q8BHH8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.57■□□□□ 0.4
Clrn3Q8BHH8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn3Q8BHH8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.55■□□□□ 0.4
Clrn3Q8BHH8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clrn3Q8BHH8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn3Q8BHH8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn3Q8BHH8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Clrn3Q8BHH8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.55■□□□□ 0.4
Clrn3Q8BHH8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn3Q8BHH8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn3Q8BHH8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn3Q8BHH8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Clrn3Q8BHH8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn3Q8BHH8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn3Q8BHH8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn3Q8BHH8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.54■□□□□ 0.4
Clrn3Q8BHH8 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.54■□□□□ 0.4
Clrn3Q8BHH8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn3Q8BHH8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn3Q8BHH8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms