Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Gm10232-201ENSMUST00000089221 720 ntBASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc5a7Q8BGY9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Slc5a7Q8BGY9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc5a7Q8BGY9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Slc5a7Q8BGY9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.5■□□□□ 0.23
Slc5a7Q8BGY9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Slc5a7Q8BGY9 Gm40881-201ENSMUST00000223397 166 ntBASIC16.5■□□□□ 0.23
Slc5a7Q8BGY9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc5a7Q8BGY9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc5a7Q8BGY9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc5a7Q8BGY9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc5a7Q8BGY9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc5a7Q8BGY9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc5a7Q8BGY9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Slc5a7Q8BGY9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc5a7Q8BGY9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc5a7Q8BGY9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Slc5a7Q8BGY9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc5a7Q8BGY9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc5a7Q8BGY9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc5a7Q8BGY9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.46■□□□□ 0.23
Slc5a7Q8BGY9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.46■□□□□ 0.23
Slc5a7Q8BGY9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Slc5a7Q8BGY9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Slc5a7Q8BGY9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Slc5a7Q8BGY9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc5a7Q8BGY9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
Slc5a7Q8BGY9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc5a7Q8BGY9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms