Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Samm50Q8BGH2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC22■■□□□ 1.11
Samm50Q8BGH2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Samm50Q8BGH2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Samm50Q8BGH2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Samm50Q8BGH2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Samm50Q8BGH2 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.99■■□□□ 1.11
Samm50Q8BGH2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Samm50Q8BGH2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Samm50Q8BGH2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Samm50Q8BGH2 Gm5874-201ENSMUST00000096101 508 ntBASIC21.99■■□□□ 1.11
Samm50Q8BGH2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Samm50Q8BGH2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Samm50Q8BGH2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Samm50Q8BGH2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Samm50Q8BGH2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Samm50Q8BGH2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Samm50Q8BGH2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.99■■□□□ 1.11
Samm50Q8BGH2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Samm50Q8BGH2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Samm50Q8BGH2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Samm50Q8BGH2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Samm50Q8BGH2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Samm50Q8BGH2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.98■■□□□ 1.11
Samm50Q8BGH2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Samm50Q8BGH2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Samm50Q8BGH2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.98■■□□□ 1.11
Samm50Q8BGH2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Samm50Q8BGH2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Rarb-207ENSMUST00000225921 2756 ntBASIC21.97■■□□□ 1.11
Samm50Q8BGH2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Samm50Q8BGH2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Samm50Q8BGH2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Samm50Q8BGH2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Samm50Q8BGH2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Samm50Q8BGH2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.96■■□□□ 1.11
Samm50Q8BGH2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.96■■□□□ 1.11
Samm50Q8BGH2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Samm50Q8BGH2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Samm50Q8BGH2 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.96■■□□□ 1.11
Samm50Q8BGH2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Samm50Q8BGH2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Samm50Q8BGH2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Samm50Q8BGH2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Samm50Q8BGH2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Samm50Q8BGH2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Samm50Q8BGH2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
Samm50Q8BGH2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Samm50Q8BGH2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Samm50Q8BGH2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.94■■□□□ 1.1
Samm50Q8BGH2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Samm50Q8BGH2 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.94■■□□□ 1.1
Samm50Q8BGH2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Samm50Q8BGH2 Gm10493-201ENSMUST00000097270 612 ntBASIC21.94■■□□□ 1.1
Samm50Q8BGH2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Samm50Q8BGH2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Samm50Q8BGH2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Samm50Q8BGH2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Samm50Q8BGH2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Samm50Q8BGH2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms