Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 Golph3-205ENSMUST00000228671 2842 ntBASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Gm42642-201ENSMUST00000200683 355 ntBASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4bQ8BGE6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 Gm10033-202ENSMUST00000211874 928 ntBASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4bQ8BGE6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4bQ8BGE6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4bQ8BGE6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4bQ8BGE6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Atg4bQ8BGE6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4bQ8BGE6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4bQ8BGE6 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.7■□□□□ 0.42
Atg4bQ8BGE6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Atg4bQ8BGE6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4bQ8BGE6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4bQ8BGE6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4bQ8BGE6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.7■□□□□ 0.42
Atg4bQ8BGE6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4bQ8BGE6 BC021767-201ENSMUST00000126387 1716 ntBASIC17.69■□□□□ 0.42
Atg4bQ8BGE6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4bQ8BGE6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4bQ8BGE6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.69■□□□□ 0.42
Atg4bQ8BGE6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4bQ8BGE6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4bQ8BGE6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Atg4bQ8BGE6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4bQ8BGE6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Atg4bQ8BGE6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4bQ8BGE6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4bQ8BGE6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Gm13534-201ENSMUST00000121169 513 ntBASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Gm18671-201ENSMUST00000214826 683 ntBASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4bQ8BGE6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms