Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npas4Q8BGD7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npas4Q8BGD7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npas4Q8BGD7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.92■□□□□ 0.78
Npas4Q8BGD7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npas4Q8BGD7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Npas4Q8BGD7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npas4Q8BGD7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npas4Q8BGD7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npas4Q8BGD7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Npas4Q8BGD7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npas4Q8BGD7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Npas4Q8BGD7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npas4Q8BGD7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npas4Q8BGD7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Npas4Q8BGD7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
Npas4Q8BGD7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npas4Q8BGD7 Gm715-201ENSMUST00000117865 831 ntBASIC19.91■□□□□ 0.78
Npas4Q8BGD7 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.91■□□□□ 0.78
Npas4Q8BGD7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.91■□□□□ 0.78
Npas4Q8BGD7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npas4Q8BGD7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npas4Q8BGD7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npas4Q8BGD7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npas4Q8BGD7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.91■□□□□ 0.78
Npas4Q8BGD7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npas4Q8BGD7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Npas4Q8BGD7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Gm15378-201ENSMUST00000121894 207 ntBASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Gm7977-201ENSMUST00000193787 748 ntBASIC19.9■□□□□ 0.78
Npas4Q8BGD7 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npas4Q8BGD7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Npas4Q8BGD7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Npas4Q8BGD7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Npas4Q8BGD7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Npas4Q8BGD7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.89■□□□□ 0.77
Npas4Q8BGD7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npas4Q8BGD7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Npas4Q8BGD7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npas4Q8BGD7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npas4Q8BGD7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npas4Q8BGD7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npas4Q8BGD7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npas4Q8BGD7 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.88■□□□□ 0.77
Npas4Q8BGD7 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.88■□□□□ 0.77
Npas4Q8BGD7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npas4Q8BGD7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Npas4Q8BGD7 Gm13836-201ENSMUST00000121159 501 ntBASIC19.88■□□□□ 0.77
Npas4Q8BGD7 Gm13158-201ENSMUST00000122007 736 ntBASIC19.88■□□□□ 0.77
Npas4Q8BGD7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Npas4Q8BGD7 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.88■□□□□ 0.77
Npas4Q8BGD7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npas4Q8BGD7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npas4Q8BGD7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npas4Q8BGD7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Npas4Q8BGD7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Npas4Q8BGD7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Npas4Q8BGD7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Npas4Q8BGD7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Npas4Q8BGD7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npas4Q8BGD7 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.87■□□□□ 0.77
Npas4Q8BGD7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.87■□□□□ 0.77
Npas4Q8BGD7 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.87■□□□□ 0.77
Npas4Q8BGD7 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.87■□□□□ 0.77
Npas4Q8BGD7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npas4Q8BGD7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npas4Q8BGD7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npas4Q8BGD7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms