Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Zc3hc1Q80YV2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zc3hc1Q80YV2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3hc1Q80YV2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3hc1Q80YV2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Zc3hc1Q80YV2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Zc3hc1Q80YV2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3hc1Q80YV2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3hc1Q80YV2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3hc1Q80YV2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3hc1Q80YV2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3hc1Q80YV2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3hc1Q80YV2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3hc1Q80YV2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3hc1Q80YV2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3hc1Q80YV2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3hc1Q80YV2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3hc1Q80YV2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Zc3hc1Q80YV2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3hc1Q80YV2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3hc1Q80YV2 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.18■□□□□ 0.34
Zc3hc1Q80YV2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3hc1Q80YV2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.17■□□□□ 0.34
Zc3hc1Q80YV2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Zc3hc1Q80YV2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3hc1Q80YV2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3hc1Q80YV2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3hc1Q80YV2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.17■□□□□ 0.34
Zc3hc1Q80YV2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.17■□□□□ 0.34
Zc3hc1Q80YV2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3hc1Q80YV2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3hc1Q80YV2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3hc1Q80YV2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3hc1Q80YV2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.17■□□□□ 0.34
Zc3hc1Q80YV2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3hc1Q80YV2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3hc1Q80YV2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Zc3hc1Q80YV2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3hc1Q80YV2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.15■□□□□ 0.34
Zc3hc1Q80YV2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.15■□□□□ 0.34
Zc3hc1Q80YV2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3hc1Q80YV2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3hc1Q80YV2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3hc1Q80YV2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Zc3hc1Q80YV2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Zc3hc1Q80YV2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Zc3hc1Q80YV2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Zc3hc1Q80YV2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3hc1Q80YV2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3hc1Q80YV2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.14■□□□□ 0.33
Zc3hc1Q80YV2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3hc1Q80YV2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3hc1Q80YV2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Zc3hc1Q80YV2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3hc1Q80YV2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3hc1Q80YV2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3hc1Q80YV2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3hc1Q80YV2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3hc1Q80YV2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Zc3hc1Q80YV2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3hc1Q80YV2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3hc1Q80YV2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3hc1Q80YV2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3hc1Q80YV2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3hc1Q80YV2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3hc1Q80YV2 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.12■□□□□ 0.33
Zc3hc1Q80YV2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3hc1Q80YV2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3hc1Q80YV2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zc3hc1Q80YV2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Zc3hc1Q80YV2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms