Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.03■□□□□ 0.48
Otop1Q80VM9 Gm2559-201ENSMUST00000201323 363 ntBASIC18.03■□□□□ 0.48
Otop1Q80VM9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Otop1Q80VM9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Otop1Q80VM9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Otop1Q80VM9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Otop1Q80VM9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.02■□□□□ 0.48
Otop1Q80VM9 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.02■□□□□ 0.48
Otop1Q80VM9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Otop1Q80VM9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Otop1Q80VM9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Otop1Q80VM9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Otop1Q80VM9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Otop1Q80VM9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Otop1Q80VM9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Otop1Q80VM9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Otop1Q80VM9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Otop1Q80VM9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Otop1Q80VM9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.01■□□□□ 0.47
Otop1Q80VM9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Otop1Q80VM9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Otop1Q80VM9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Otop1Q80VM9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Otop1Q80VM9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Otop1Q80VM9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Otop1Q80VM9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Otop1Q80VM9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Otop1Q80VM9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Otop1Q80VM9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Otop1Q80VM9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Otop1Q80VM9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Otop1Q80VM9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Otop1Q80VM9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Otop1Q80VM9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Otop1Q80VM9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18■□□□□ 0.47
Otop1Q80VM9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Otop1Q80VM9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Otop1Q80VM9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Gm715-201ENSMUST00000117865 831 ntBASIC17.99■□□□□ 0.47
Otop1Q80VM9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Otop1Q80VM9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Otop1Q80VM9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.98■□□□□ 0.47
Otop1Q80VM9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Otop1Q80VM9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.97■□□□□ 0.47
Otop1Q80VM9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.97■□□□□ 0.47
Otop1Q80VM9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Otop1Q80VM9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.96■□□□□ 0.47
Otop1Q80VM9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms