Protein–RNA interactions for Protein: Q80VM3

Ttc29, Tetratricopeptide repeat protein 29, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc29Q80VM3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ttc29Q80VM3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc29Q80VM3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc29Q80VM3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc29Q80VM3 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.02■□□□□ 0.48
Ttc29Q80VM3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc29Q80VM3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ttc29Q80VM3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ttc29Q80VM3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ttc29Q80VM3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Gm7290-201ENSMUST00000104990 617 ntBASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Gm12918-201ENSMUST00000120234 636 ntBASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Gm15710-201ENSMUST00000121821 636 ntBASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Gm5075-201ENSMUST00000196916 622 ntBASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc29Q80VM3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc29Q80VM3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18■□□□□ 0.47
Ttc29Q80VM3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc29Q80VM3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc29Q80VM3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18■□□□□ 0.47
Ttc29Q80VM3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18■□□□□ 0.47
Ttc29Q80VM3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18■□□□□ 0.47
Ttc29Q80VM3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc29Q80VM3 Gm6365-201ENSMUST00000054711 744 ntBASIC18■□□□□ 0.47
Ttc29Q80VM3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc29Q80VM3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc29Q80VM3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ttc29Q80VM3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc29Q80VM3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ttc29Q80VM3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.99■□□□□ 0.47
Ttc29Q80VM3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc29Q80VM3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.98■□□□□ 0.47
Ttc29Q80VM3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc29Q80VM3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc29Q80VM3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc29Q80VM3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ttc29Q80VM3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc29Q80VM3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms