Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdh19Q80TF3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdh19Q80TF3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh19Q80TF3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh19Q80TF3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh19Q80TF3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdh19Q80TF3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh19Q80TF3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh19Q80TF3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh19Q80TF3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh19Q80TF3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh19Q80TF3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh19Q80TF3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh19Q80TF3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh19Q80TF3 Gm13148-201ENSMUST00000118892 745 ntBASIC18.47■□□□□ 0.55
Pcdh19Q80TF3 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.47■□□□□ 0.55
Pcdh19Q80TF3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh19Q80TF3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh19Q80TF3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdh19Q80TF3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdh19Q80TF3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh19Q80TF3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh19Q80TF3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdh19Q80TF3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh19Q80TF3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh19Q80TF3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Pcdh19Q80TF3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh19Q80TF3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh19Q80TF3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Pcdh19Q80TF3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh19Q80TF3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh19Q80TF3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh19Q80TF3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh19Q80TF3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdh19Q80TF3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh19Q80TF3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh19Q80TF3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh19Q80TF3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh19Q80TF3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Pcdh19Q80TF3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Pcdh19Q80TF3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Pcdh19Q80TF3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh19Q80TF3 Gm4968-201ENSMUST00000071458 858 ntBASIC18.45■□□□□ 0.54
Pcdh19Q80TF3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh19Q80TF3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh19Q80TF3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh19Q80TF3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Gm27011-201ENSMUST00000182352 972 ntBASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh19Q80TF3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh19Q80TF3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh19Q80TF3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh19Q80TF3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh19Q80TF3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh19Q80TF3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh19Q80TF3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh19Q80TF3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms