Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm43006-201ENSMUST00000197702 1602 ntBASIC29.5■■■□□ 2.31
Rpap1Q80TE0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Rpap1Q80TE0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rpap1Q80TE0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Rpap1Q80TE0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Rpap1Q80TE0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rpap1Q80TE0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rpap1Q80TE0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rpap1Q80TE0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC29.49■■■□□ 2.31
Rpap1Q80TE0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rpap1Q80TE0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
Rpap1Q80TE0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC29.48■■■□□ 2.31
Rpap1Q80TE0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Rpap1Q80TE0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC29.48■■■□□ 2.31
Rpap1Q80TE0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Rpap1Q80TE0 Gm45640-201ENSMUST00000210665 1896 ntBASIC29.48■■■□□ 2.31
Rpap1Q80TE0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
Rpap1Q80TE0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC29.47■■■□□ 2.31
Rpap1Q80TE0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC29.47■■■□□ 2.31
Rpap1Q80TE0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Rpap1Q80TE0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Rpap1Q80TE0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Rpap1Q80TE0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Rpap1Q80TE0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Rpap1Q80TE0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC29.46■■■□□ 2.31
Rpap1Q80TE0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
Rpap1Q80TE0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC29.46■■■□□ 2.31
Rpap1Q80TE0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC29.46■■■□□ 2.31
Rpap1Q80TE0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rpap1Q80TE0 Gm5540-201ENSMUST00000131852 1848 ntBASIC29.46■■■□□ 2.31
Rpap1Q80TE0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rpap1Q80TE0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC29.45■■■□□ 2.31
Rpap1Q80TE0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Rpap1Q80TE0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
Rpap1Q80TE0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Rpap1Q80TE0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Rpap1Q80TE0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC29.45■■■□□ 2.31
Rpap1Q80TE0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Rpap1Q80TE0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Rpap1Q80TE0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Rpap1Q80TE0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
Rpap1Q80TE0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Rpap1Q80TE0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rpap1Q80TE0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rpap1Q80TE0 Gm10231-201ENSMUST00000181584 441 ntBASIC29.44■■■□□ 2.3
Rpap1Q80TE0 Alkbh1-212ENSMUST00000185301 408 ntBASIC29.44■■■□□ 2.3
Rpap1Q80TE0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rpap1Q80TE0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC29.44■■■□□ 2.3
Rpap1Q80TE0 Gm10175-202ENSMUST00000208752 441 ntBASIC29.44■■■□□ 2.3
Rpap1Q80TE0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
Rpap1Q80TE0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC29.44■■■□□ 2.3
Rpap1Q80TE0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rpap1Q80TE0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Rpap1Q80TE0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rpap1Q80TE0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rpap1Q80TE0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
Rpap1Q80TE0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Rpap1Q80TE0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rpap1Q80TE0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rpap1Q80TE0 Gm43799-201ENSMUST00000201845 579 ntBASIC29.43■■■□□ 2.3
Rpap1Q80TE0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Rpap1Q80TE0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rpap1Q80TE0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Rpap1Q80TE0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Rpap1Q80TE0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Rpap1Q80TE0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Rpap1Q80TE0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Rpap1Q80TE0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC29.42■■■□□ 2.3
Rpap1Q80TE0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Rpap1Q80TE0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Rpap1Q80TE0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Rpap1Q80TE0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rpap1Q80TE0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
Rpap1Q80TE0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC29.41■■■□□ 2.3
Rpap1Q80TE0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Rpap1Q80TE0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rpap1Q80TE0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rpap1Q80TE0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rpap1Q80TE0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Rpap1Q80TE0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Rpap1Q80TE0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Rpap1Q80TE0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Rpap1Q80TE0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Rpap1Q80TE0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Rpap1Q80TE0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.29
Rpap1Q80TE0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.29
Rpap1Q80TE0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC29.38■■■□□ 2.29
Rpap1Q80TE0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
Rpap1Q80TE0 Gm5417-201ENSMUST00000079706 384 ntBASIC29.38■■■□□ 2.29
Rpap1Q80TE0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Rpap1Q80TE0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Rpap1Q80TE0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Rpap1Q80TE0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Rpap1Q80TE0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Rpap1Q80TE0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Rpap1Q80TE0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Rpap1Q80TE0 Gm11927-201ENSMUST00000118472 759 ntBASIC29.37■■■□□ 2.29
Rpap1Q80TE0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
Rpap1Q80TE0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Rpap1Q80TE0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms