Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim17Q7TPM3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim17Q7TPM3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim17Q7TPM3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim17Q7TPM3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim17Q7TPM3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim17Q7TPM3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim17Q7TPM3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim17Q7TPM3 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.46■□□□□ 0.71
Trim17Q7TPM3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim17Q7TPM3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim17Q7TPM3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim17Q7TPM3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim17Q7TPM3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim17Q7TPM3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim17Q7TPM3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim17Q7TPM3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim17Q7TPM3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim17Q7TPM3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim17Q7TPM3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim17Q7TPM3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim17Q7TPM3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim17Q7TPM3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim17Q7TPM3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim17Q7TPM3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim17Q7TPM3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim17Q7TPM3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trim17Q7TPM3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.44■□□□□ 0.7
Trim17Q7TPM3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim17Q7TPM3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim17Q7TPM3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim17Q7TPM3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Gm12896-201ENSMUST00000118430 226 ntBASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Gm13836-201ENSMUST00000121159 501 ntBASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim17Q7TPM3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim17Q7TPM3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim17Q7TPM3 Gm7860-201ENSMUST00000121190 879 ntBASIC19.42■□□□□ 0.7
Trim17Q7TPM3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim17Q7TPM3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim17Q7TPM3 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.42■□□□□ 0.7
Trim17Q7TPM3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim17Q7TPM3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim17Q7TPM3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim17Q7TPM3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim17Q7TPM3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Trim17Q7TPM3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim17Q7TPM3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim17Q7TPM3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim17Q7TPM3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim17Q7TPM3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim17Q7TPM3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim17Q7TPM3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim17Q7TPM3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim17Q7TPM3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim17Q7TPM3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim17Q7TPM3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Gm6576-201ENSMUST00000169678 883 ntBASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms