Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn4bQ7M729 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Scn4bQ7M729 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn4bQ7M729 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Gm38205-201ENSMUST00000192243 258 ntBASIC18.32■□□□□ 0.52
Scn4bQ7M729 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn4bQ7M729 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn4bQ7M729 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn4bQ7M729 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scn4bQ7M729 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Scn4bQ7M729 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Scn4bQ7M729 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scn4bQ7M729 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Scn4bQ7M729 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Scn4bQ7M729 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.31■□□□□ 0.52
Scn4bQ7M729 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scn4bQ7M729 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.31■□□□□ 0.52
Scn4bQ7M729 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.3■□□□□ 0.52
Scn4bQ7M729 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Scn4bQ7M729 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn4bQ7M729 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn4bQ7M729 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn4bQ7M729 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn4bQ7M729 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn4bQ7M729 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.29■□□□□ 0.52
Scn4bQ7M729 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn4bQ7M729 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn4bQ7M729 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn4bQ7M729 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.29■□□□□ 0.52
Scn4bQ7M729 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn4bQ7M729 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn4bQ7M729 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn4bQ7M729 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn4bQ7M729 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn4bQ7M729 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn4bQ7M729 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn4bQ7M729 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn4bQ7M729 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn4bQ7M729 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn4bQ7M729 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn4bQ7M729 Gm9988-201ENSMUST00000069786 435 ntBASIC18.28■□□□□ 0.52
Scn4bQ7M729 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.28■□□□□ 0.52
Scn4bQ7M729 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn4bQ7M729 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scn4bQ7M729 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Scn4bQ7M729 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn4bQ7M729 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Scn4bQ7M729 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn4bQ7M729 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.27■□□□□ 0.52
Scn4bQ7M729 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.27■□□□□ 0.52
Scn4bQ7M729 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Scn4bQ7M729 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scn4bQ7M729 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn4bQ7M729 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Scn4bQ7M729 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn4bQ7M729 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Scn4bQ7M729 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Scn4bQ7M729 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Scn4bQ7M729 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.26■□□□□ 0.51
Scn4bQ7M729 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms