Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vma21Q78T54 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.33■□□□□ 0.04
Vma21Q78T54 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vma21Q78T54 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.33■□□□□ 0.04
Vma21Q78T54 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vma21Q78T54 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vma21Q78T54 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Vma21Q78T54 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vma21Q78T54 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Vma21Q78T54 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vma21Q78T54 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.32■□□□□ 0.04
Vma21Q78T54 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vma21Q78T54 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vma21Q78T54 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vma21Q78T54 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.32■□□□□ 0.04
Vma21Q78T54 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vma21Q78T54 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vma21Q78T54 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vma21Q78T54 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Vma21Q78T54 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vma21Q78T54 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vma21Q78T54 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vma21Q78T54 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vma21Q78T54 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vma21Q78T54 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vma21Q78T54 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vma21Q78T54 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vma21Q78T54 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vma21Q78T54 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vma21Q78T54 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vma21Q78T54 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vma21Q78T54 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vma21Q78T54 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vma21Q78T54 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vma21Q78T54 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vma21Q78T54 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vma21Q78T54 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vma21Q78T54 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Vma21Q78T54 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vma21Q78T54 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vma21Q78T54 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vma21Q78T54 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.3■□□□□ 0.04
Vma21Q78T54 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vma21Q78T54 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.3■□□□□ 0.04
Vma21Q78T54 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.3■□□□□ 0.04
Vma21Q78T54 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vma21Q78T54 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vma21Q78T54 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vma21Q78T54 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vma21Q78T54 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vma21Q78T54 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Vma21Q78T54 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.29■□□□□ 0.04
Vma21Q78T54 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vma21Q78T54 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vma21Q78T54 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.29■□□□□ 0.04
Vma21Q78T54 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.29■□□□□ 0.04
Vma21Q78T54 Spcs1-204ENSMUST00000226782 949 ntBASIC15.29■□□□□ 0.04
Vma21Q78T54 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vma21Q78T54 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vma21Q78T54 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vma21Q78T54 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vma21Q78T54 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vma21Q78T54 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vma21Q78T54 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vma21Q78T54 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vma21Q78T54 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vma21Q78T54 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vma21Q78T54 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vma21Q78T54 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vma21Q78T54 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vma21Q78T54 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vma21Q78T54 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vma21Q78T54 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vma21Q78T54 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vma21Q78T54 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.28■□□□□ 0.04
Vma21Q78T54 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.28■□□□□ 0.04
Vma21Q78T54 Gm9847-201ENSMUST00000052528 599 ntBASIC15.28■□□□□ 0.04
Vma21Q78T54 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vma21Q78T54 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vma21Q78T54 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vma21Q78T54 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vma21Q78T54 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vma21Q78T54 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vma21Q78T54 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vma21Q78T54 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.27■□□□□ 0.04
Vma21Q78T54 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vma21Q78T54 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms