Protein–RNA interactions for Protein: Q6Q473

Clca4a, Calcium-activated chloride channel regulator 4A, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca4aQ6Q473 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Clca4aQ6Q473 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Clca4aQ6Q473 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clca4aQ6Q473 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clca4aQ6Q473 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clca4aQ6Q473 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Clca4aQ6Q473 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Clca4aQ6Q473 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clca4aQ6Q473 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Clca4aQ6Q473 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Clca4aQ6Q473 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clca4aQ6Q473 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clca4aQ6Q473 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clca4aQ6Q473 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clca4aQ6Q473 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clca4aQ6Q473 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Clca4aQ6Q473 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Clca4aQ6Q473 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.44■■□□□ 1.02
Clca4aQ6Q473 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.44■■□□□ 1.02
Clca4aQ6Q473 Gm27011-201ENSMUST00000182352 972 ntBASIC21.44■■□□□ 1.02
Clca4aQ6Q473 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Clca4aQ6Q473 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Clca4aQ6Q473 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Clca4aQ6Q473 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.44■■□□□ 1.02
Clca4aQ6Q473 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clca4aQ6Q473 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Clca4aQ6Q473 Gm5408-201ENSMUST00000197998 747 ntBASIC21.43■■□□□ 1.02
Clca4aQ6Q473 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clca4aQ6Q473 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Clca4aQ6Q473 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Clca4aQ6Q473 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.43■■□□□ 1.02
Clca4aQ6Q473 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clca4aQ6Q473 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clca4aQ6Q473 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clca4aQ6Q473 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.42■■□□□ 1.02
Clca4aQ6Q473 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Clca4aQ6Q473 Gm26524-201ENSMUST00000192339 390 ntBASIC21.42■■□□□ 1.02
Clca4aQ6Q473 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.42■■□□□ 1.02
Clca4aQ6Q473 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Clca4aQ6Q473 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Clca4aQ6Q473 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Clca4aQ6Q473 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Clca4aQ6Q473 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.42■■□□□ 1.02
Clca4aQ6Q473 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.41■■□□□ 1.02
Clca4aQ6Q473 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Clca4aQ6Q473 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clca4aQ6Q473 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clca4aQ6Q473 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clca4aQ6Q473 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.41■■□□□ 1.02
Clca4aQ6Q473 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.41■■□□□ 1.02
Clca4aQ6Q473 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.41■■□□□ 1.02
Clca4aQ6Q473 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clca4aQ6Q473 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clca4aQ6Q473 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clca4aQ6Q473 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Clca4aQ6Q473 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clca4aQ6Q473 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clca4aQ6Q473 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
Clca4aQ6Q473 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clca4aQ6Q473 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clca4aQ6Q473 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Clca4aQ6Q473 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clca4aQ6Q473 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.4■■□□□ 1.02
Clca4aQ6Q473 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clca4aQ6Q473 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.4■■□□□ 1.02
Clca4aQ6Q473 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Clca4aQ6Q473 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Clca4aQ6Q473 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Clca4aQ6Q473 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
Clca4aQ6Q473 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Clca4aQ6Q473 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.39■■□□□ 1.01
Clca4aQ6Q473 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clca4aQ6Q473 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.39■■□□□ 1.01
Clca4aQ6Q473 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.39■■□□□ 1.01
Clca4aQ6Q473 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clca4aQ6Q473 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.39■■□□□ 1.01
Clca4aQ6Q473 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clca4aQ6Q473 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clca4aQ6Q473 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.39■■□□□ 1.01
Clca4aQ6Q473 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.39■■□□□ 1.01
Clca4aQ6Q473 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clca4aQ6Q473 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clca4aQ6Q473 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Clca4aQ6Q473 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
Clca4aQ6Q473 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clca4aQ6Q473 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.38■■□□□ 1.01
Clca4aQ6Q473 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Clca4aQ6Q473 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.38■■□□□ 1.01
Clca4aQ6Q473 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Clca4aQ6Q473 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Clca4aQ6Q473 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Clca4aQ6Q473 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Clca4aQ6Q473 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Clca4aQ6Q473 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Clca4aQ6Q473 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.37■■□□□ 1.01
Clca4aQ6Q473 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Clca4aQ6Q473 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Clca4aQ6Q473 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Clca4aQ6Q473 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Clca4aQ6Q473 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms