Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smarca1Q6PGB8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smarca1Q6PGB8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smarca1Q6PGB8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarca1Q6PGB8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarca1Q6PGB8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarca1Q6PGB8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarca1Q6PGB8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarca1Q6PGB8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarca1Q6PGB8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarca1Q6PGB8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarca1Q6PGB8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarca1Q6PGB8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smarca1Q6PGB8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.94■□□□□ 0.94
Smarca1Q6PGB8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarca1Q6PGB8 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.94■□□□□ 0.94
Smarca1Q6PGB8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarca1Q6PGB8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca1Q6PGB8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca1Q6PGB8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca1Q6PGB8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.93■□□□□ 0.94
Smarca1Q6PGB8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.93■□□□□ 0.94
Smarca1Q6PGB8 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.93■□□□□ 0.94
Smarca1Q6PGB8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Smarca1Q6PGB8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca1Q6PGB8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca1Q6PGB8 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.93■□□□□ 0.94
Smarca1Q6PGB8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca1Q6PGB8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Smarca1Q6PGB8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Gm13146-201ENSMUST00000118508 780 ntBASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca1Q6PGB8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca1Q6PGB8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca1Q6PGB8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
Smarca1Q6PGB8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarca1Q6PGB8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.89■□□□□ 0.93
Smarca1Q6PGB8 Gm7514-201ENSMUST00000209475 934 ntBASIC20.89■□□□□ 0.93
Smarca1Q6PGB8 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.89■□□□□ 0.93
Smarca1Q6PGB8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarca1Q6PGB8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarca1Q6PGB8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Smarca1Q6PGB8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarca1Q6PGB8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca1Q6PGB8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca1Q6PGB8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca1Q6PGB8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca1Q6PGB8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca1Q6PGB8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca1Q6PGB8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca1Q6PGB8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Smarca1Q6PGB8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.88■□□□□ 0.93
Smarca1Q6PGB8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca1Q6PGB8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca1Q6PGB8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarca1Q6PGB8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca1Q6PGB8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarca1Q6PGB8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Smarca1Q6PGB8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms