Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim45Q6PFY8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim45Q6PFY8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim45Q6PFY8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim45Q6PFY8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim45Q6PFY8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.75■□□□□ 0.43
Trim45Q6PFY8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim45Q6PFY8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim45Q6PFY8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim45Q6PFY8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.75■□□□□ 0.43
Trim45Q6PFY8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.75■□□□□ 0.43
Trim45Q6PFY8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim45Q6PFY8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim45Q6PFY8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim45Q6PFY8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Trim45Q6PFY8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim45Q6PFY8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim45Q6PFY8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim45Q6PFY8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim45Q6PFY8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim45Q6PFY8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim45Q6PFY8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim45Q6PFY8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim45Q6PFY8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim45Q6PFY8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim45Q6PFY8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim45Q6PFY8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Trim45Q6PFY8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim45Q6PFY8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim45Q6PFY8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim45Q6PFY8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim45Q6PFY8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim45Q6PFY8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim45Q6PFY8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim45Q6PFY8 Golph3-205ENSMUST00000228671 2842 ntBASIC17.72■□□□□ 0.43
Trim45Q6PFY8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim45Q6PFY8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim45Q6PFY8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim45Q6PFY8 Gm13234-201ENSMUST00000120010 747 ntBASIC17.72■□□□□ 0.43
Trim45Q6PFY8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim45Q6PFY8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trim45Q6PFY8 Gm9988-201ENSMUST00000069786 435 ntBASIC17.72■□□□□ 0.43
Trim45Q6PFY8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim45Q6PFY8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim45Q6PFY8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim45Q6PFY8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim45Q6PFY8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim45Q6PFY8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim45Q6PFY8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Trim45Q6PFY8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms