Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
ShbQ6PD21 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ShbQ6PD21 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.63■□□□□ 0.89
ShbQ6PD21 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.63■□□□□ 0.89
ShbQ6PD21 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ShbQ6PD21 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ShbQ6PD21 Mtag2-201ENSMUST00000058665 714 ntBASIC20.63■□□□□ 0.89
ShbQ6PD21 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ShbQ6PD21 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ShbQ6PD21 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ShbQ6PD21 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShbQ6PD21 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShbQ6PD21 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ShbQ6PD21 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ShbQ6PD21 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ShbQ6PD21 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.62■□□□□ 0.89
ShbQ6PD21 Odf3b-204ENSMUST00000227834 930 ntBASIC20.62■□□□□ 0.89
ShbQ6PD21 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShbQ6PD21 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShbQ6PD21 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ShbQ6PD21 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShbQ6PD21 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ShbQ6PD21 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ShbQ6PD21 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShbQ6PD21 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShbQ6PD21 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShbQ6PD21 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShbQ6PD21 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ShbQ6PD21 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShbQ6PD21 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ShbQ6PD21 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.61■□□□□ 0.89
ShbQ6PD21 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.61■□□□□ 0.89
ShbQ6PD21 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.61■□□□□ 0.89
ShbQ6PD21 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ShbQ6PD21 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ShbQ6PD21 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShbQ6PD21 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShbQ6PD21 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.6■□□□□ 0.89
ShbQ6PD21 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ShbQ6PD21 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ShbQ6PD21 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ShbQ6PD21 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ShbQ6PD21 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShbQ6PD21 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.59■□□□□ 0.89
ShbQ6PD21 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShbQ6PD21 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.59■□□□□ 0.89
ShbQ6PD21 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShbQ6PD21 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShbQ6PD21 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShbQ6PD21 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.59■□□□□ 0.89
ShbQ6PD21 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShbQ6PD21 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShbQ6PD21 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ShbQ6PD21 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShbQ6PD21 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ShbQ6PD21 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ShbQ6PD21 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ShbQ6PD21 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ShbQ6PD21 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.58■□□□□ 0.89
ShbQ6PD21 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ShbQ6PD21 Gm3375-201ENSMUST00000203929 796 ntBASIC20.58■□□□□ 0.89
ShbQ6PD21 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ShbQ6PD21 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ShbQ6PD21 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ShbQ6PD21 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ShbQ6PD21 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ShbQ6PD21 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.58■□□□□ 0.88
ShbQ6PD21 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.57■□□□□ 0.88
ShbQ6PD21 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.57■□□□□ 0.88
ShbQ6PD21 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShbQ6PD21 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ShbQ6PD21 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShbQ6PD21 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.57■□□□□ 0.88
ShbQ6PD21 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.57■□□□□ 0.88
ShbQ6PD21 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShbQ6PD21 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShbQ6PD21 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ShbQ6PD21 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShbQ6PD21 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ShbQ6PD21 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShbQ6PD21 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShbQ6PD21 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ShbQ6PD21 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShbQ6PD21 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShbQ6PD21 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShbQ6PD21 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ShbQ6PD21 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ShbQ6PD21 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ShbQ6PD21 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ShbQ6PD21 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ShbQ6PD21 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
ShbQ6PD21 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.55■□□□□ 0.88
ShbQ6PD21 Gm23634-201ENSMUST00000175071 91 ntBASIC20.55■□□□□ 0.88
ShbQ6PD21 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.55■□□□□ 0.88
ShbQ6PD21 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ShbQ6PD21 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ShbQ6PD21 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ShbQ6PD21 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ShbQ6PD21 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ShbQ6PD21 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms