Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Cep290Q6A078 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cep290Q6A078 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cep290Q6A078 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cep290Q6A078 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cep290Q6A078 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.38■□□□□ 0.69
Cep290Q6A078 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cep290Q6A078 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cep290Q6A078 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cep290Q6A078 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cep290Q6A078 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cep290Q6A078 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.37■□□□□ 0.69
Cep290Q6A078 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cep290Q6A078 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cep290Q6A078 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cep290Q6A078 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cep290Q6A078 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cep290Q6A078 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.36■□□□□ 0.69
Cep290Q6A078 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cep290Q6A078 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cep290Q6A078 Gm14859-201ENSMUST00000117752 357 ntBASIC19.36■□□□□ 0.69
Cep290Q6A078 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.36■□□□□ 0.69
Cep290Q6A078 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.36■□□□□ 0.69
Cep290Q6A078 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cep290Q6A078 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cep290Q6A078 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cep290Q6A078 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cep290Q6A078 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cep290Q6A078 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cep290Q6A078 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cep290Q6A078 Gm18025-201ENSMUST00000221733 862 ntBASIC19.35■□□□□ 0.69
Cep290Q6A078 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cep290Q6A078 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cep290Q6A078 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cep290Q6A078 Gm18032-201ENSMUST00000222541 538 ntBASIC19.35■□□□□ 0.69
Cep290Q6A078 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cep290Q6A078 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cep290Q6A078 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cep290Q6A078 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cep290Q6A078 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cep290Q6A078 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Cep290Q6A078 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cep290Q6A078 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.34■□□□□ 0.69
Cep290Q6A078 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.34■□□□□ 0.69
Cep290Q6A078 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cep290Q6A078 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cep290Q6A078 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.34■□□□□ 0.69
Cep290Q6A078 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cep290Q6A078 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cep290Q6A078 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cep290Q6A078 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cep290Q6A078 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Cep290Q6A078 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.33■□□□□ 0.69
Cep290Q6A078 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.33■□□□□ 0.69
Cep290Q6A078 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cep290Q6A078 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cep290Q6A078 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cep290Q6A078 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cep290Q6A078 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cep290Q6A078 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cep290Q6A078 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cep290Q6A078 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.33■□□□□ 0.68
Cep290Q6A078 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cep290Q6A078 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cep290Q6A078 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cep290Q6A078 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Cep290Q6A078 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.32■□□□□ 0.68
Cep290Q6A078 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cep290Q6A078 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cep290Q6A078 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cep290Q6A078 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cep290Q6A078 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.31■□□□□ 0.68
Cep290Q6A078 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cep290Q6A078 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.31■□□□□ 0.68
Cep290Q6A078 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cep290Q6A078 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cep290Q6A078 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cep290Q6A078 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cep290Q6A078 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cep290Q6A078 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.31■□□□□ 0.68
Cep290Q6A078 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cep290Q6A078 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cep290Q6A078 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cep290Q6A078 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
Cep290Q6A078 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.3■□□□□ 0.68
Cep290Q6A078 Gm7284-201ENSMUST00000131667 944 ntBASIC19.3■□□□□ 0.68
Cep290Q6A078 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cep290Q6A078 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cep290Q6A078 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cep290Q6A078 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cep290Q6A078 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cep290Q6A078 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.3■□□□□ 0.68
Cep290Q6A078 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.3■□□□□ 0.68
Cep290Q6A078 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.3■□□□□ 0.68
Cep290Q6A078 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cep290Q6A078 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cep290Q6A078 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cep290Q6A078 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cep290Q6A078 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.29■□□□□ 0.68
Cep290Q6A078 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms