Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ltn1Q6A009 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.58■■□□□ 1.2
Ltn1Q6A009 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ltn1Q6A009 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ltn1Q6A009 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ltn1Q6A009 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Ltn1Q6A009 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC22.57■■□□□ 1.2
Ltn1Q6A009 Gm15378-201ENSMUST00000121894 207 ntBASIC22.57■■□□□ 1.2
Ltn1Q6A009 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC22.57■■□□□ 1.2
Ltn1Q6A009 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ltn1Q6A009 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.57■■□□□ 1.2
Ltn1Q6A009 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ltn1Q6A009 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ltn1Q6A009 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Ltn1Q6A009 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ltn1Q6A009 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ltn1Q6A009 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ltn1Q6A009 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ltn1Q6A009 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ltn1Q6A009 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ltn1Q6A009 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC22.55■■□□□ 1.2
Ltn1Q6A009 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ltn1Q6A009 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC22.55■■□□□ 1.2
Ltn1Q6A009 Gm11927-201ENSMUST00000118472 759 ntBASIC22.55■■□□□ 1.2
Ltn1Q6A009 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ltn1Q6A009 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ltn1Q6A009 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ltn1Q6A009 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Ltn1Q6A009 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Ltn1Q6A009 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Ltn1Q6A009 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ltn1Q6A009 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ltn1Q6A009 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ltn1Q6A009 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Ltn1Q6A009 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC22.54■■□□□ 1.2
Ltn1Q6A009 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ltn1Q6A009 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ltn1Q6A009 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
Ltn1Q6A009 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ltn1Q6A009 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.54■■□□□ 1.2
Ltn1Q6A009 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ltn1Q6A009 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ltn1Q6A009 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ltn1Q6A009 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ltn1Q6A009 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ltn1Q6A009 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Ltn1Q6A009 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Ltn1Q6A009 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Ltn1Q6A009 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC22.53■■□□□ 1.2
Ltn1Q6A009 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Ltn1Q6A009 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Ltn1Q6A009 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Ltn1Q6A009 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ltn1Q6A009 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ltn1Q6A009 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Ltn1Q6A009 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ltn1Q6A009 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ltn1Q6A009 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ltn1Q6A009 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
Ltn1Q6A009 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ltn1Q6A009 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Ltn1Q6A009 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.52■■□□□ 1.2
Ltn1Q6A009 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Ltn1Q6A009 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Ltn1Q6A009 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ltn1Q6A009 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ltn1Q6A009 Gm20472-201ENSMUST00000174403 1240 ntBASIC22.51■■□□□ 1.19
Ltn1Q6A009 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ltn1Q6A009 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Ltn1Q6A009 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ltn1Q6A009 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ltn1Q6A009 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ltn1Q6A009 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ltn1Q6A009 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ltn1Q6A009 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Ltn1Q6A009 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
Ltn1Q6A009 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC22.5■■□□□ 1.19
Ltn1Q6A009 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ltn1Q6A009 AC175538.1-201ENSMUST00000225343 1269 ntBASIC22.5■■□□□ 1.19
Ltn1Q6A009 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ltn1Q6A009 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.5■■□□□ 1.19
Ltn1Q6A009 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ltn1Q6A009 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ltn1Q6A009 Gm11643-201ENSMUST00000119578 864 ntBASIC22.5■■□□□ 1.19
Ltn1Q6A009 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Ltn1Q6A009 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ltn1Q6A009 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Ltn1Q6A009 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ltn1Q6A009 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ltn1Q6A009 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ltn1Q6A009 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ltn1Q6A009 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ltn1Q6A009 H2-K2-201ENSMUST00000174250 1049 ntBASIC22.48■■□□□ 1.19
Ltn1Q6A009 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ltn1Q6A009 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ltn1Q6A009 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ltn1Q6A009 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ltn1Q6A009 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ltn1Q6A009 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ltn1Q6A009 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms