Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Col11a2Q64739 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC23.17■■□□□ 1.3
Col11a2Q64739 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col11a2Q64739 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col11a2Q64739 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Col11a2Q64739 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC23.17■■□□□ 1.3
Col11a2Q64739 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col11a2Q64739 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Col11a2Q64739 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Col11a2Q64739 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Col11a2Q64739 Gm10459-201ENSMUST00000202708 1155 ntBASIC23.16■■□□□ 1.3
Col11a2Q64739 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC23.16■■□□□ 1.3
Col11a2Q64739 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.16■■□□□ 1.3
Col11a2Q64739 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Col11a2Q64739 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col11a2Q64739 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col11a2Q64739 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col11a2Q64739 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col11a2Q64739 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col11a2Q64739 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col11a2Q64739 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Col11a2Q64739 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC23.16■■□□□ 1.3
Col11a2Q64739 Gm3375-201ENSMUST00000203929 796 ntBASIC23.16■■□□□ 1.3
Col11a2Q64739 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col11a2Q64739 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col11a2Q64739 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Col11a2Q64739 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Col11a2Q64739 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col11a2Q64739 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col11a2Q64739 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC23.15■■□□□ 1.3
Col11a2Q64739 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC23.15■■□□□ 1.3
Col11a2Q64739 Gm30025-201ENSMUST00000218555 728 ntBASIC23.15■■□□□ 1.3
Col11a2Q64739 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col11a2Q64739 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col11a2Q64739 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col11a2Q64739 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col11a2Q64739 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Col11a2Q64739 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Col11a2Q64739 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Col11a2Q64739 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Col11a2Q64739 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Col11a2Q64739 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Col11a2Q64739 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.14■■□□□ 1.29
Col11a2Q64739 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Col11a2Q64739 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col11a2Q64739 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC23.13■■□□□ 1.29
Col11a2Q64739 Gm11539-201ENSMUST00000119837 557 ntBASIC23.13■■□□□ 1.29
Col11a2Q64739 Gm13436-201ENSMUST00000120418 567 ntBASIC23.13■■□□□ 1.29
Col11a2Q64739 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col11a2Q64739 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col11a2Q64739 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.13■■□□□ 1.29
Col11a2Q64739 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col11a2Q64739 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC23.13■■□□□ 1.29
Col11a2Q64739 AC160393.1-201ENSMUST00000218378 1279 ntBASIC23.13■■□□□ 1.29
Col11a2Q64739 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col11a2Q64739 Gm7367-201ENSMUST00000057611 492 ntBASIC23.13■■□□□ 1.29
Col11a2Q64739 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Col11a2Q64739 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col11a2Q64739 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col11a2Q64739 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.13■■□□□ 1.29
Col11a2Q64739 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col11a2Q64739 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col11a2Q64739 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col11a2Q64739 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col11a2Q64739 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Col11a2Q64739 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Col11a2Q64739 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC23.12■■□□□ 1.29
Col11a2Q64739 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col11a2Q64739 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col11a2Q64739 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col11a2Q64739 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Col11a2Q64739 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
Col11a2Q64739 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col11a2Q64739 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Col11a2Q64739 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col11a2Q64739 Gm13559-201ENSMUST00000120476 863 ntBASIC23.11■■□□□ 1.29
Col11a2Q64739 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC23.11■■□□□ 1.29
Col11a2Q64739 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col11a2Q64739 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col11a2Q64739 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Col11a2Q64739 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC23.1■■□□□ 1.29
Col11a2Q64739 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Col11a2Q64739 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Col11a2Q64739 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
Col11a2Q64739 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col11a2Q64739 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
Col11a2Q64739 Gm6659-201ENSMUST00000174752 547 ntBASIC23.09■■□□□ 1.29
Col11a2Q64739 Gm21362-201ENSMUST00000194272 928 ntBASIC23.09■■□□□ 1.29
Col11a2Q64739 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Col11a2Q64739 Mtag2-201ENSMUST00000058665 714 ntBASIC23.09■■□□□ 1.29
Col11a2Q64739 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.09■■□□□ 1.29
Col11a2Q64739 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col11a2Q64739 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC23.08■■□□□ 1.29
Col11a2Q64739 Flg-201ENSMUST00000050758 1488 ntBASIC23.08■■□□□ 1.29
Col11a2Q64739 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC23.08■■□□□ 1.29
Col11a2Q64739 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC23.08■■□□□ 1.29
Col11a2Q64739 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC23.08■■□□□ 1.29
Col11a2Q64739 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC23.08■■□□□ 1.29
Col11a2Q64739 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC23.08■■□□□ 1.29
Col11a2Q64739 Gm18025-201ENSMUST00000221733 862 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms