Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Nespas-201ENSMUST00000143738 1083 ntBASIC18.01■□□□□ 0.47
Sdc3Q64519 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.01■□□□□ 0.47
Sdc3Q64519 Gm6420-201ENSMUST00000193885 723 ntBASIC18.01■□□□□ 0.47
Sdc3Q64519 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Sdc3Q64519 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdc3Q64519 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Sdc3Q64519 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sdc3Q64519 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sdc3Q64519 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.01■□□□□ 0.47
Sdc3Q64519 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.01■□□□□ 0.47
Sdc3Q64519 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Sdc3Q64519 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sdc3Q64519 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18■□□□□ 0.47
Sdc3Q64519 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18■□□□□ 0.47
Sdc3Q64519 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18■□□□□ 0.47
Sdc3Q64519 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18■□□□□ 0.47
Sdc3Q64519 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18■□□□□ 0.47
Sdc3Q64519 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18■□□□□ 0.47
Sdc3Q64519 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sdc3Q64519 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Sdc3Q64519 Gm10602-201ENSMUST00000098239 609 ntBASIC18■□□□□ 0.47
Sdc3Q64519 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18■□□□□ 0.47
Sdc3Q64519 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sdc3Q64519 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sdc3Q64519 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sdc3Q64519 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sdc3Q64519 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sdc3Q64519 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sdc3Q64519 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sdc3Q64519 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sdc3Q64519 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sdc3Q64519 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Sdc3Q64519 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Sdc3Q64519 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Sdc3Q64519 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc3Q64519 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc3Q64519 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc3Q64519 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.97■□□□□ 0.47
Sdc3Q64519 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.97■□□□□ 0.47
Sdc3Q64519 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc3Q64519 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc3Q64519 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc3Q64519 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc3Q64519 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc3Q64519 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc3Q64519 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc3Q64519 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc3Q64519 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc3Q64519 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc3Q64519 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc3Q64519 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Sdc3Q64519 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc3Q64519 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc3Q64519 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc3Q64519 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc3Q64519 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc3Q64519 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.95■□□□□ 0.46
Sdc3Q64519 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc3Q64519 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc3Q64519 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.95■□□□□ 0.46
Sdc3Q64519 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc3Q64519 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc3Q64519 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc3Q64519 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sdc3Q64519 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc3Q64519 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.95■□□□□ 0.46
Sdc3Q64519 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc3Q64519 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc3Q64519 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc3Q64519 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Sdc3Q64519 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc3Q64519 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc3Q64519 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc3Q64519 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Sdc3Q64519 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc3Q64519 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.94■□□□□ 0.46
Sdc3Q64519 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Sdc3Q64519 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc3Q64519 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Sdc3Q64519 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc3Q64519 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc3Q64519 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc3Q64519 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc3Q64519 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc3Q64519 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc3Q64519 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc3Q64519 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.93■□□□□ 0.46
Sdc3Q64519 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc3Q64519 Gm13534-201ENSMUST00000121169 513 ntBASIC17.93■□□□□ 0.46
Sdc3Q64519 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sdc3Q64519 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc3Q64519 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc3Q64519 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc3Q64519 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc3Q64519 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc3Q64519 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sdc3Q64519 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Sdc3Q64519 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sdc3Q64519 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
Sdc3Q64519 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms