Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Clcn1Q64347 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Clcn1Q64347 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Clcn1Q64347 AC135963.1-201ENSMUST00000211640 717 ntBASIC23.86■■□□□ 1.41
Clcn1Q64347 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Clcn1Q64347 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC23.86■■□□□ 1.41
Clcn1Q64347 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Clcn1Q64347 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Clcn1Q64347 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.86■■□□□ 1.41
Clcn1Q64347 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Clcn1Q64347 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Clcn1Q64347 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Clcn1Q64347 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC23.85■■□□□ 1.41
Clcn1Q64347 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Clcn1Q64347 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Clcn1Q64347 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Clcn1Q64347 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Clcn1Q64347 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Clcn1Q64347 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Clcn1Q64347 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Clcn1Q64347 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Clcn1Q64347 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Clcn1Q64347 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Clcn1Q64347 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Clcn1Q64347 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Clcn1Q64347 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Clcn1Q64347 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Clcn1Q64347 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Clcn1Q64347 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Clcn1Q64347 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Clcn1Q64347 Dio3-201ENSMUST00000097228 1449 ntBASIC23.83■■□□□ 1.4
Clcn1Q64347 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Clcn1Q64347 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Clcn1Q64347 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Clcn1Q64347 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC23.82■■□□□ 1.4
Clcn1Q64347 Gm22325-201ENSMUST00000158904 308 ntBASIC23.82■■□□□ 1.4
Clcn1Q64347 AL672049.1-201ENSMUST00000197943 91 ntBASIC23.82■■□□□ 1.4
Clcn1Q64347 Gm2559-201ENSMUST00000201323 363 ntBASIC23.82■■□□□ 1.4
Clcn1Q64347 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC23.82■■□□□ 1.4
Clcn1Q64347 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Clcn1Q64347 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Clcn1Q64347 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Clcn1Q64347 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.82■■□□□ 1.4
Clcn1Q64347 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Clcn1Q64347 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Clcn1Q64347 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Clcn1Q64347 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Clcn1Q64347 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Clcn1Q64347 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Clcn1Q64347 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Clcn1Q64347 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Clcn1Q64347 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.8■■□□□ 1.4
Clcn1Q64347 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Clcn1Q64347 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Clcn1Q64347 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
Clcn1Q64347 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Clcn1Q64347 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Clcn1Q64347 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Clcn1Q64347 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Clcn1Q64347 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC23.8■■□□□ 1.4
Clcn1Q64347 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC23.8■■□□□ 1.4
Clcn1Q64347 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Clcn1Q64347 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Clcn1Q64347 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Clcn1Q64347 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC23.79■■□□□ 1.4
Clcn1Q64347 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Clcn1Q64347 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Clcn1Q64347 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC23.79■■□□□ 1.4
Clcn1Q64347 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Clcn1Q64347 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Clcn1Q64347 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Clcn1Q64347 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Clcn1Q64347 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Clcn1Q64347 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Clcn1Q64347 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Clcn1Q64347 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Clcn1Q64347 Gm11249-201ENSMUST00000117071 859 ntBASIC23.78■■□□□ 1.4
Clcn1Q64347 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Clcn1Q64347 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Clcn1Q64347 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23.78■■□□□ 1.4
Clcn1Q64347 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Clcn1Q64347 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Clcn1Q64347 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Clcn1Q64347 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Clcn1Q64347 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Clcn1Q64347 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
Clcn1Q64347 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC23.77■■□□□ 1.4
Clcn1Q64347 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Clcn1Q64347 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Clcn1Q64347 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Clcn1Q64347 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Clcn1Q64347 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Clcn1Q64347 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Clcn1Q64347 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Clcn1Q64347 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Clcn1Q64347 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Clcn1Q64347 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Clcn1Q64347 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC23.76■■□□□ 1.39
Clcn1Q64347 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC23.76■■□□□ 1.39
Clcn1Q64347 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms