Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxn1Q61575 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Foxn1Q61575 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Foxn1Q61575 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.6■■□□□ 1.05
Foxn1Q61575 Gm11539-201ENSMUST00000119837 557 ntBASIC21.6■■□□□ 1.05
Foxn1Q61575 Gm13436-201ENSMUST00000120418 567 ntBASIC21.6■■□□□ 1.05
Foxn1Q61575 Gm7889-201ENSMUST00000185591 958 ntBASIC21.6■■□□□ 1.05
Foxn1Q61575 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Foxn1Q61575 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Foxn1Q61575 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Foxn1Q61575 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Foxn1Q61575 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Foxn1Q61575 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Foxn1Q61575 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Foxn1Q61575 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.59■■□□□ 1.05
Foxn1Q61575 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Foxn1Q61575 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Foxn1Q61575 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Foxn1Q61575 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Foxn1Q61575 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.58■■□□□ 1.05
Foxn1Q61575 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Foxn1Q61575 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.58■■□□□ 1.05
Foxn1Q61575 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.58■■□□□ 1.05
Foxn1Q61575 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.58■■□□□ 1.05
Foxn1Q61575 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Foxn1Q61575 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Foxn1Q61575 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Foxn1Q61575 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Foxn1Q61575 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Foxn1Q61575 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Foxn1Q61575 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Foxn1Q61575 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Foxn1Q61575 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Foxn1Q61575 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.57■■□□□ 1.04
Foxn1Q61575 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Foxn1Q61575 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.57■■□□□ 1.04
Foxn1Q61575 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.57■■□□□ 1.04
Foxn1Q61575 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Foxn1Q61575 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Foxn1Q61575 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Foxn1Q61575 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Foxn1Q61575 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Foxn1Q61575 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Foxn1Q61575 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Foxn1Q61575 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Foxn1Q61575 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC21.56■■□□□ 1.04
Foxn1Q61575 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Foxn1Q61575 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Foxn1Q61575 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Foxn1Q61575 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Foxn1Q61575 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Foxn1Q61575 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Foxn1Q61575 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.55■■□□□ 1.04
Foxn1Q61575 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Foxn1Q61575 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Foxn1Q61575 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Foxn1Q61575 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
Foxn1Q61575 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Foxn1Q61575 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Foxn1Q61575 Gm23634-201ENSMUST00000175071 91 ntBASIC21.54■■□□□ 1.04
Foxn1Q61575 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Foxn1Q61575 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Foxn1Q61575 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Foxn1Q61575 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Foxn1Q61575 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Foxn1Q61575 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.53■■□□□ 1.04
Foxn1Q61575 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.53■■□□□ 1.04
Foxn1Q61575 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Foxn1Q61575 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Foxn1Q61575 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.52■■□□□ 1.04
Foxn1Q61575 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Foxn1Q61575 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Foxn1Q61575 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Foxn1Q61575 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Foxn1Q61575 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Foxn1Q61575 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Foxn1Q61575 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
Foxn1Q61575 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Foxn1Q61575 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Foxn1Q61575 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Foxn1Q61575 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
Foxn1Q61575 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Foxn1Q61575 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Foxn1Q61575 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Foxn1Q61575 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Foxn1Q61575 Gm33142-201ENSMUST00000193913 867 ntBASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms