Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ift88Q61371 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ift88Q61371 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ift88Q61371 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ift88Q61371 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.8■□□□□ 0.92
Ift88Q61371 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ift88Q61371 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ift88Q61371 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ift88Q61371 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ift88Q61371 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ift88Q61371 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.8■□□□□ 0.92
Ift88Q61371 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ift88Q61371 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.79■□□□□ 0.92
Ift88Q61371 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ift88Q61371 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ift88Q61371 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ift88Q61371 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ift88Q61371 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Ift88Q61371 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.79■□□□□ 0.92
Ift88Q61371 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.79■□□□□ 0.92
Ift88Q61371 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ift88Q61371 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ift88Q61371 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.79■□□□□ 0.92
Ift88Q61371 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ift88Q61371 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ift88Q61371 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ift88Q61371 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ift88Q61371 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.78■□□□□ 0.92
Ift88Q61371 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ift88Q61371 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ift88Q61371 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ift88Q61371 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ift88Q61371 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ift88Q61371 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ift88Q61371 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ift88Q61371 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ift88Q61371 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ift88Q61371 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ift88Q61371 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ift88Q61371 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ift88Q61371 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.77■□□□□ 0.92
Ift88Q61371 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ift88Q61371 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.77■□□□□ 0.92
Ift88Q61371 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.77■□□□□ 0.92
Ift88Q61371 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.77■□□□□ 0.92
Ift88Q61371 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ift88Q61371 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ift88Q61371 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ift88Q61371 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ift88Q61371 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ift88Q61371 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.77■□□□□ 0.92
Ift88Q61371 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ift88Q61371 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ift88Q61371 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ift88Q61371 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Ift88Q61371 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ift88Q61371 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ift88Q61371 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.76■□□□□ 0.91
Ift88Q61371 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ift88Q61371 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ift88Q61371 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ift88Q61371 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ift88Q61371 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.76■□□□□ 0.91
Ift88Q61371 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.76■□□□□ 0.91
Ift88Q61371 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ift88Q61371 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ift88Q61371 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.76■□□□□ 0.91
Ift88Q61371 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ift88Q61371 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ift88Q61371 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.76■□□□□ 0.91
Ift88Q61371 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ift88Q61371 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ift88Q61371 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ift88Q61371 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ift88Q61371 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.75■□□□□ 0.91
Ift88Q61371 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.75■□□□□ 0.91
Ift88Q61371 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ift88Q61371 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ift88Q61371 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ift88Q61371 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.74■□□□□ 0.91
Ift88Q61371 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.74■□□□□ 0.91
Ift88Q61371 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ift88Q61371 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.74■□□□□ 0.91
Ift88Q61371 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ift88Q61371 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ift88Q61371 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms