Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Six4Q61321 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.05■□□□□ 0.64
Six4Q61321 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Six4Q61321 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.04■□□□□ 0.64
Six4Q61321 BC021767-201ENSMUST00000126387 1716 ntBASIC19.04■□□□□ 0.64
Six4Q61321 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Gm6420-201ENSMUST00000193885 723 ntBASIC19.04■□□□□ 0.64
Six4Q61321 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Six4Q61321 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Six4Q61321 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.04■□□□□ 0.64
Six4Q61321 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six4Q61321 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Six4Q61321 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Six4Q61321 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six4Q61321 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six4Q61321 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six4Q61321 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six4Q61321 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.03■□□□□ 0.64
Six4Q61321 Nespas-201ENSMUST00000143738 1083 ntBASIC19.03■□□□□ 0.64
Six4Q61321 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Six4Q61321 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six4Q61321 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six4Q61321 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six4Q61321 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six4Q61321 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Six4Q61321 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six4Q61321 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six4Q61321 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Six4Q61321 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.02■□□□□ 0.64
Six4Q61321 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six4Q61321 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Six4Q61321 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Six4Q61321 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Six4Q61321 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six4Q61321 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.01■□□□□ 0.63
Six4Q61321 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six4Q61321 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.01■□□□□ 0.63
Six4Q61321 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Six4Q61321 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six4Q61321 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six4Q61321 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six4Q61321 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Six4Q61321 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Six4Q61321 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six4Q61321 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six4Q61321 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six4Q61321 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six4Q61321 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19■□□□□ 0.63
Six4Q61321 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19■□□□□ 0.63
Six4Q61321 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six4Q61321 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19■□□□□ 0.63
Six4Q61321 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19■□□□□ 0.63
Six4Q61321 Gm27405-201ENSMUST00000184201 112 ntBASIC19■□□□□ 0.63
Six4Q61321 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six4Q61321 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19■□□□□ 0.63
Six4Q61321 Gm10167-201ENSMUST00000150411 1479 ntBASIC19■□□□□ 0.63
Six4Q61321 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six4Q61321 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six4Q61321 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six4Q61321 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six4Q61321 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Six4Q61321 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Six4Q61321 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six4Q61321 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six4Q61321 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six4Q61321 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.99■□□□□ 0.63
Six4Q61321 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Six4Q61321 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Six4Q61321 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six4Q61321 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Six4Q61321 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Six4Q61321 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Six4Q61321 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Six4Q61321 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six4Q61321 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Six4Q61321 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Six4Q61321 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Six4Q61321 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six4Q61321 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six4Q61321 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six4Q61321 Gm7291-201ENSMUST00000199147 382 ntBASIC18.98■□□□□ 0.63
Six4Q61321 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Six4Q61321 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.98■□□□□ 0.63
Six4Q61321 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms