Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Ptch1Q61115 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Ptch1Q61115 Snhg20-203ENSMUST00000182811 2153 ntBASIC27.56■■■□□ 2
Ptch1Q61115 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Ptch1Q61115 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ptch1Q61115 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
Ptch1Q61115 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ptch1Q61115 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC27.55■■■□□ 2
Ptch1Q61115 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ptch1Q61115 Flg-201ENSMUST00000050758 1488 ntBASIC27.54■■■□□ 2
Ptch1Q61115 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Ptch1Q61115 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC27.54■■■□□ 2
Ptch1Q61115 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC27.54■■■□□ 2
Ptch1Q61115 Gm43183-201ENSMUST00000200632 547 ntBASIC27.54■■■□□ 2
Ptch1Q61115 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC27.54■■■□□ 2
Ptch1Q61115 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC27.54■■■□□ 2
Ptch1Q61115 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
Ptch1Q61115 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC27.54■■■□□ 2
Ptch1Q61115 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ptch1Q61115 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
Ptch1Q61115 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC27.53■■■□□ 2
Ptch1Q61115 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ptch1Q61115 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC27.53■■■□□ 2
Ptch1Q61115 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ptch1Q61115 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ptch1Q61115 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ptch1Q61115 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ptch1Q61115 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC27.53■■■□□ 2
Ptch1Q61115 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC27.53■■■□□ 2
Ptch1Q61115 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC27.53■■■□□ 2
Ptch1Q61115 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC27.52■■■□□ 2
Ptch1Q61115 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ptch1Q61115 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ptch1Q61115 Gm6728-201ENSMUST00000178117 1065 ntBASIC27.52■■■□□ 2
Ptch1Q61115 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ptch1Q61115 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ptch1Q61115 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC27.52■■■□□ 2
Ptch1Q61115 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ptch1Q61115 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC27.52■■■□□ 2
Ptch1Q61115 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
Ptch1Q61115 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ptch1Q61115 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC27.51■■□□□ 1.99
Ptch1Q61115 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Ptch1Q61115 Gm10517-202ENSMUST00000192970 758 ntBASIC27.51■■□□□ 1.99
Ptch1Q61115 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Ptch1Q61115 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ptch1Q61115 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ptch1Q61115 Mtag2-201ENSMUST00000058665 714 ntBASIC27.51■■□□□ 1.99
Ptch1Q61115 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Ptch1Q61115 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ptch1Q61115 Gm3375-201ENSMUST00000203929 796 ntBASIC27.5■■□□□ 1.99
Ptch1Q61115 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
Ptch1Q61115 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ptch1Q61115 Gm12504-201ENSMUST00000120860 2231 ntBASIC27.5■■□□□ 1.99
Ptch1Q61115 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC27.5■■□□□ 1.99
Ptch1Q61115 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Ptch1Q61115 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC27.5■■□□□ 1.99
Ptch1Q61115 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Ptch1Q61115 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Ptch1Q61115 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC27.49■■□□□ 1.99
Ptch1Q61115 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC27.49■■□□□ 1.99
Ptch1Q61115 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC27.49■■□□□ 1.99
Ptch1Q61115 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ptch1Q61115 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ptch1Q61115 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC27.49■■□□□ 1.99
Ptch1Q61115 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ptch1Q61115 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ptch1Q61115 AC152827.1-201ENSMUST00000221143 2189 ntBASIC27.48■■□□□ 1.99
Ptch1Q61115 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ptch1Q61115 AC160393.1-201ENSMUST00000218378 1279 ntBASIC27.48■■□□□ 1.99
Ptch1Q61115 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ptch1Q61115 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Ptch1Q61115 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ptch1Q61115 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
Ptch1Q61115 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Ptch1Q61115 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ptch1Q61115 Gm17641-201ENSMUST00000166328 2350 ntBASIC27.48■■□□□ 1.99
Ptch1Q61115 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ptch1Q61115 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ptch1Q61115 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC27.47■■□□□ 1.99
Ptch1Q61115 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Ptch1Q61115 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ptch1Q61115 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
Ptch1Q61115 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Ptch1Q61115 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Ptch1Q61115 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC27.46■■□□□ 1.99
Ptch1Q61115 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Ptch1Q61115 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Ptch1Q61115 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Ptch1Q61115 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Ptch1Q61115 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Ptch1Q61115 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Ptch1Q61115 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC27.45■■□□□ 1.98
Ptch1Q61115 Otx2os1-204ENSMUST00000227221 751 ntBASIC27.45■■□□□ 1.98
Ptch1Q61115 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC27.45■■□□□ 1.98
Ptch1Q61115 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
Ptch1Q61115 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Ptch1Q61115 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Ptch1Q61115 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC27.44■■□□□ 1.98
Ptch1Q61115 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms