Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col12a1Q60847 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col12a1Q60847 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col12a1Q60847 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.86■□□□□ 0.61
Col12a1Q60847 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.86■□□□□ 0.61
Col12a1Q60847 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Col12a1Q60847 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col12a1Q60847 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col12a1Q60847 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col12a1Q60847 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col12a1Q60847 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col12a1Q60847 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col12a1Q60847 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col12a1Q60847 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col12a1Q60847 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col12a1Q60847 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Col12a1Q60847 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col12a1Q60847 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Col12a1Q60847 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col12a1Q60847 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col12a1Q60847 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col12a1Q60847 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col12a1Q60847 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col12a1Q60847 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col12a1Q60847 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col12a1Q60847 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col12a1Q60847 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col12a1Q60847 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col12a1Q60847 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Col12a1Q60847 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col12a1Q60847 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col12a1Q60847 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col12a1Q60847 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Col12a1Q60847 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col12a1Q60847 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col12a1Q60847 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.84■□□□□ 0.61
Col12a1Q60847 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.84■□□□□ 0.61
Col12a1Q60847 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.84■□□□□ 0.61
Col12a1Q60847 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col12a1Q60847 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Col12a1Q60847 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.83■□□□□ 0.61
Col12a1Q60847 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col12a1Q60847 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col12a1Q60847 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col12a1Q60847 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col12a1Q60847 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Col12a1Q60847 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col12a1Q60847 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col12a1Q60847 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.83■□□□□ 0.6
Col12a1Q60847 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col12a1Q60847 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col12a1Q60847 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.82■□□□□ 0.6
Col12a1Q60847 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Col12a1Q60847 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.82■□□□□ 0.6
Col12a1Q60847 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.82■□□□□ 0.6
Col12a1Q60847 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.82■□□□□ 0.6
Col12a1Q60847 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.82■□□□□ 0.6
Col12a1Q60847 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col12a1Q60847 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col12a1Q60847 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col12a1Q60847 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col12a1Q60847 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col12a1Q60847 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col12a1Q60847 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col12a1Q60847 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col12a1Q60847 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col12a1Q60847 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col12a1Q60847 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col12a1Q60847 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Gm44771-201ENSMUST00000206975 626 ntBASIC18.8■□□□□ 0.6
Col12a1Q60847 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.8■□□□□ 0.6
Col12a1Q60847 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Col12a1Q60847 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.8■□□□□ 0.6
Col12a1Q60847 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.8■□□□□ 0.6
Col12a1Q60847 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col12a1Q60847 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col12a1Q60847 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col12a1Q60847 AA414768-201ENSMUST00000121924 1257 ntBASIC18.79■□□□□ 0.6
Col12a1Q60847 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Col12a1Q60847 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.79■□□□□ 0.6
Col12a1Q60847 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col12a1Q60847 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col12a1Q60847 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col12a1Q60847 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col12a1Q60847 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col12a1Q60847 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col12a1Q60847 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col12a1Q60847 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms