Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr3Q5U430 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr3Q5U430 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr3Q5U430 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr3Q5U430 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr3Q5U430 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr3Q5U430 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ubr3Q5U430 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC23.21■■□□□ 1.31
Ubr3Q5U430 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ubr3Q5U430 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.21■■□□□ 1.31
Ubr3Q5U430 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.31
Ubr3Q5U430 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Ubr3Q5U430 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Ubr3Q5U430 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.2■■□□□ 1.3
Ubr3Q5U430 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Ubr3Q5U430 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC23.2■■□□□ 1.3
Ubr3Q5U430 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ubr3Q5U430 AC160393.1-201ENSMUST00000218378 1279 ntBASIC23.2■■□□□ 1.3
Ubr3Q5U430 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC23.2■■□□□ 1.3
Ubr3Q5U430 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ubr3Q5U430 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Ubr3Q5U430 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ubr3Q5U430 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Ubr3Q5U430 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ubr3Q5U430 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ubr3Q5U430 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ubr3Q5U430 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ubr3Q5U430 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ubr3Q5U430 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.18■■□□□ 1.3
Ubr3Q5U430 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
Ubr3Q5U430 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ubr3Q5U430 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ubr3Q5U430 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ubr3Q5U430 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ubr3Q5U430 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ubr3Q5U430 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ubr3Q5U430 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr3Q5U430 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr3Q5U430 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr3Q5U430 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr3Q5U430 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.17■■□□□ 1.3
Ubr3Q5U430 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr3Q5U430 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr3Q5U430 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr3Q5U430 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC23.17■■□□□ 1.3
Ubr3Q5U430 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC23.17■■□□□ 1.3
Ubr3Q5U430 Gm11539-201ENSMUST00000119837 557 ntBASIC23.17■■□□□ 1.3
Ubr3Q5U430 Gm13436-201ENSMUST00000120418 567 ntBASIC23.17■■□□□ 1.3
Ubr3Q5U430 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Ubr3Q5U430 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr3Q5U430 Gm6659-201ENSMUST00000174752 547 ntBASIC23.17■■□□□ 1.3
Ubr3Q5U430 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Ubr3Q5U430 Gm30025-201ENSMUST00000218555 728 ntBASIC23.17■■□□□ 1.3
Ubr3Q5U430 Gm18025-201ENSMUST00000221733 862 ntBASIC23.17■■□□□ 1.3
Ubr3Q5U430 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubr3Q5U430 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr3Q5U430 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr3Q5U430 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr3Q5U430 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC23.16■■□□□ 1.3
Ubr3Q5U430 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr3Q5U430 Flg-201ENSMUST00000050758 1488 ntBASIC23.16■■□□□ 1.3
Ubr3Q5U430 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr3Q5U430 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr3Q5U430 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ubr3Q5U430 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr3Q5U430 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ubr3Q5U430 Gm13559-201ENSMUST00000120476 863 ntBASIC23.15■■□□□ 1.3
Ubr3Q5U430 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
Ubr3Q5U430 Gm10459-201ENSMUST00000202708 1155 ntBASIC23.15■■□□□ 1.3
Ubr3Q5U430 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr3Q5U430 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC23.15■■□□□ 1.3
Ubr3Q5U430 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ubr3Q5U430 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC23.15■■□□□ 1.3
Ubr3Q5U430 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Ubr3Q5U430 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Ubr3Q5U430 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ubr3Q5U430 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC23.14■■□□□ 1.29
Ubr3Q5U430 Mtag2-201ENSMUST00000058665 714 ntBASIC23.14■■□□□ 1.29
Ubr3Q5U430 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ubr3Q5U430 Zfp783-201ENSMUST00000095946 670 ntBASIC23.14■■□□□ 1.29
Ubr3Q5U430 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Ubr3Q5U430 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ubr3Q5U430 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.14■■□□□ 1.29
Ubr3Q5U430 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ubr3Q5U430 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr3Q5U430 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr3Q5U430 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr3Q5U430 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Ubr3Q5U430 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC23.13■■□□□ 1.29
Ubr3Q5U430 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC23.13■■□□□ 1.29
Ubr3Q5U430 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr3Q5U430 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr3Q5U430 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ubr3Q5U430 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
Ubr3Q5U430 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr3Q5U430 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr3Q5U430 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr3Q5U430 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr3Q5U430 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr3Q5U430 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms