Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Fst-202ENSMUST00000223640 2612 ntBASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-4Q5R1H9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-4Q5R1H9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav7d-4Q5R1H9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Gm10399-202ENSMUST00000202768 748 ntBASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms