Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
Trav8d-1Q5R1H8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8d-1Q5R1H8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav8d-1Q5R1H8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8d-1Q5R1H8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8d-1Q5R1H8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8d-1Q5R1H8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8d-1Q5R1H8 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms