Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2bQ56A07 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.61■□□□□ 0.57
Scn2bQ56A07 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.6■□□□□ 0.57
Scn2bQ56A07 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.6■□□□□ 0.57
Scn2bQ56A07 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.6■□□□□ 0.57
Scn2bQ56A07 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn2bQ56A07 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn2bQ56A07 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn2bQ56A07 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.59■□□□□ 0.57
Scn2bQ56A07 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Scn2bQ56A07 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn2bQ56A07 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn2bQ56A07 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Scn2bQ56A07 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn2bQ56A07 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.59■□□□□ 0.57
Scn2bQ56A07 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn2bQ56A07 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scn2bQ56A07 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn2bQ56A07 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn2bQ56A07 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scn2bQ56A07 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.58■□□□□ 0.56
Scn2bQ56A07 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn2bQ56A07 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Scn2bQ56A07 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn2bQ56A07 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn2bQ56A07 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn2bQ56A07 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn2bQ56A07 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn2bQ56A07 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2bQ56A07 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Gm43173-201ENSMUST00000202246 593 ntBASIC18.57■□□□□ 0.56
Scn2bQ56A07 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2bQ56A07 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.57■□□□□ 0.56
Scn2bQ56A07 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn2bQ56A07 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Scn2bQ56A07 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn2bQ56A07 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Scn2bQ56A07 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms