Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Syne3Q4FZC9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Syne3Q4FZC9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Syne3Q4FZC9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Syne3Q4FZC9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Syne3Q4FZC9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Syne3Q4FZC9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Syne3Q4FZC9 Gm18284-201ENSMUST00000172604 624 ntBASIC19.91■□□□□ 0.78
Syne3Q4FZC9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Syne3Q4FZC9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Syne3Q4FZC9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Syne3Q4FZC9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Syne3Q4FZC9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Syne3Q4FZC9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Gm5874-201ENSMUST00000096101 508 ntBASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.9■□□□□ 0.78
Syne3Q4FZC9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Syne3Q4FZC9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syne3Q4FZC9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Syne3Q4FZC9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Syne3Q4FZC9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.89■□□□□ 0.77
Syne3Q4FZC9 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.89■□□□□ 0.77
Syne3Q4FZC9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syne3Q4FZC9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syne3Q4FZC9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
Syne3Q4FZC9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syne3Q4FZC9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syne3Q4FZC9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syne3Q4FZC9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syne3Q4FZC9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Syne3Q4FZC9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Syne3Q4FZC9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Syne3Q4FZC9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Syne3Q4FZC9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Syne3Q4FZC9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Syne3Q4FZC9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.88■□□□□ 0.77
Syne3Q4FZC9 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.88■□□□□ 0.77
Syne3Q4FZC9 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.88■□□□□ 0.77
Syne3Q4FZC9 Gm42778-201ENSMUST00000199644 553 ntBASIC19.88■□□□□ 0.77
Syne3Q4FZC9 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.88■□□□□ 0.77
Syne3Q4FZC9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Syne3Q4FZC9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Syne3Q4FZC9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Syne3Q4FZC9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Syne3Q4FZC9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Syne3Q4FZC9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Syne3Q4FZC9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Syne3Q4FZC9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Syne3Q4FZC9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Syne3Q4FZC9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Syne3Q4FZC9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Syne3Q4FZC9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Syne3Q4FZC9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Syne3Q4FZC9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Syne3Q4FZC9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Syne3Q4FZC9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Syne3Q4FZC9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Syne3Q4FZC9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Syne3Q4FZC9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Syne3Q4FZC9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Syne3Q4FZC9 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.86■□□□□ 0.77
Syne3Q4FZC9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Syne3Q4FZC9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Syne3Q4FZC9 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.86■□□□□ 0.77
Syne3Q4FZC9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Syne3Q4FZC9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Syne3Q4FZC9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syne3Q4FZC9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 153.5 ms