Protein–RNA interactions for Protein: Q3V3V9

Carmil2, Capping protein, Arp2/3 and myosin-I linker protein 2, mousemouse

Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil2Q3V3V9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Carmil2Q3V3V9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Carmil2Q3V3V9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Carmil2Q3V3V9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Carmil2Q3V3V9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Carmil2Q3V3V9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Carmil2Q3V3V9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21■□□□□ 0.95
Carmil2Q3V3V9 Gm14281-201ENSMUST00000121700 1294 ntBASIC21■□□□□ 0.95
Carmil2Q3V3V9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21■□□□□ 0.95
Carmil2Q3V3V9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Carmil2Q3V3V9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Carmil2Q3V3V9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21■□□□□ 0.95
Carmil2Q3V3V9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Carmil2Q3V3V9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Carmil2Q3V3V9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Carmil2Q3V3V9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Carmil2Q3V3V9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Carmil2Q3V3V9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Carmil2Q3V3V9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Carmil2Q3V3V9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Carmil2Q3V3V9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Carmil2Q3V3V9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Carmil2Q3V3V9 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.98■□□□□ 0.95
Carmil2Q3V3V9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Carmil2Q3V3V9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Carmil2Q3V3V9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Carmil2Q3V3V9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Carmil2Q3V3V9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Carmil2Q3V3V9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Carmil2Q3V3V9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Carmil2Q3V3V9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Carmil2Q3V3V9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Carmil2Q3V3V9 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.95■□□□□ 0.94
Carmil2Q3V3V9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.95■□□□□ 0.94
Carmil2Q3V3V9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Carmil2Q3V3V9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Carmil2Q3V3V9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.95■□□□□ 0.94
Carmil2Q3V3V9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Carmil2Q3V3V9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Carmil2Q3V3V9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.95■□□□□ 0.94
Carmil2Q3V3V9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Carmil2Q3V3V9 Reep4-203ENSMUST00000226563 1444 ntBASIC20.95■□□□□ 0.94
Carmil2Q3V3V9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Carmil2Q3V3V9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Carmil2Q3V3V9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Carmil2Q3V3V9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Carmil2Q3V3V9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Carmil2Q3V3V9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Carmil2Q3V3V9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Carmil2Q3V3V9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Carmil2Q3V3V9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms