Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm13436-201ENSMUST00000120418 567 ntBASIC18.98■□□□□ 0.63
Fam196aQ3USH1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Fam196aQ3USH1 Gm7889-201ENSMUST00000185591 958 ntBASIC18.98■□□□□ 0.63
Fam196aQ3USH1 Gm18101-201ENSMUST00000215769 548 ntBASIC18.98■□□□□ 0.63
Fam196aQ3USH1 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.98■□□□□ 0.63
Fam196aQ3USH1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fam196aQ3USH1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Fam196aQ3USH1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Fam196aQ3USH1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.97■□□□□ 0.63
Fam196aQ3USH1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fam196aQ3USH1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fam196aQ3USH1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.96■□□□□ 0.63
Fam196aQ3USH1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fam196aQ3USH1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fam196aQ3USH1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.96■□□□□ 0.63
Fam196aQ3USH1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.96■□□□□ 0.63
Fam196aQ3USH1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fam196aQ3USH1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fam196aQ3USH1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Fam196aQ3USH1 Flg-201ENSMUST00000050758 1488 ntBASIC18.96■□□□□ 0.63
Fam196aQ3USH1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Fam196aQ3USH1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fam196aQ3USH1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fam196aQ3USH1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Fam196aQ3USH1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fam196aQ3USH1 Gm11927-201ENSMUST00000118472 759 ntBASIC18.95■□□□□ 0.62
Fam196aQ3USH1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Fam196aQ3USH1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fam196aQ3USH1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fam196aQ3USH1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Fam196aQ3USH1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.95■□□□□ 0.62
Fam196aQ3USH1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Fam196aQ3USH1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fam196aQ3USH1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fam196aQ3USH1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Fam196aQ3USH1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam196aQ3USH1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam196aQ3USH1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam196aQ3USH1 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.94■□□□□ 0.62
Fam196aQ3USH1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Fam196aQ3USH1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam196aQ3USH1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam196aQ3USH1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Fam196aQ3USH1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam196aQ3USH1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam196aQ3USH1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam196aQ3USH1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam196aQ3USH1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Fam196aQ3USH1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.93■□□□□ 0.62
Fam196aQ3USH1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.93■□□□□ 0.62
Fam196aQ3USH1 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.93■□□□□ 0.62
Fam196aQ3USH1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam196aQ3USH1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam196aQ3USH1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Fam196aQ3USH1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam196aQ3USH1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Gm23634-201ENSMUST00000175071 91 ntBASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Gm43183-201ENSMUST00000200632 547 ntBASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam196aQ3USH1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms