Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Q3U1D9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Q3U1D9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Q3U1D9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Q3U1D9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Q3U1D9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q3U1D9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q3U1D9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.34■□□□□ 0.21
Q3U1D9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q3U1D9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Q3U1D9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Q3U1D9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.34■□□□□ 0.21
Q3U1D9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.34■□□□□ 0.21
Q3U1D9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q3U1D9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q3U1D9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Q3U1D9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q3U1D9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q3U1D9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.33■□□□□ 0.2
Q3U1D9 Gm20760-201ENSMUST00000179197 648 ntBASIC16.33■□□□□ 0.2
Q3U1D9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Q3U1D9 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.33■□□□□ 0.2
Q3U1D9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Q3U1D9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q3U1D9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q3U1D9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q3U1D9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q3U1D9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.32■□□□□ 0.2
Q3U1D9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 Gm26524-201ENSMUST00000192339 390 ntBASIC16.32■□□□□ 0.2
Q3U1D9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 Rab3c-203ENSMUST00000224180 967 ntBASIC16.32■□□□□ 0.2
Q3U1D9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3U1D9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3U1D9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Q3U1D9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.31■□□□□ 0.2
Q3U1D9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3U1D9 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.31■□□□□ 0.2
Q3U1D9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q3U1D9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3U1D9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.31■□□□□ 0.2
Q3U1D9 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.31■□□□□ 0.2
Q3U1D9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.31■□□□□ 0.2
Q3U1D9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.31■□□□□ 0.2
Q3U1D9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3U1D9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3U1D9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3U1D9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Q3U1D9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.31■□□□□ 0.2
Q3U1D9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3U1D9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3U1D9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3U1D9 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.3■□□□□ 0.2
Q3U1D9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3U1D9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3U1D9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
Q3U1D9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.3■□□□□ 0.2
Q3U1D9 Gm10653-202ENSMUST00000139570 835 ntBASIC16.3■□□□□ 0.2
Q3U1D9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Q3U1D9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3U1D9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.3■□□□□ 0.2
Q3U1D9 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.3■□□□□ 0.2
Q3U1D9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3U1D9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3U1D9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3U1D9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3U1D9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3U1D9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3U1D9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3U1D9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3U1D9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3U1D9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3U1D9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Q3U1D9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.29■□□□□ 0.2
Q3U1D9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3U1D9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.29■□□□□ 0.2
Q3U1D9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3U1D9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Q3U1D9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3U1D9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3U1D9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q3U1D9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Q3U1D9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q3U1D9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Q3U1D9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q3U1D9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.28■□□□□ 0.2
Q3U1D9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.28■□□□□ 0.2
Q3U1D9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.28■□□□□ 0.2
Q3U1D9 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms