Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cul4aQ3TCH7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cul4aQ3TCH7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cul4aQ3TCH7 Gm11421-201ENSMUST00000122124 294 ntBASIC19.8■□□□□ 0.76
Cul4aQ3TCH7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cul4aQ3TCH7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cul4aQ3TCH7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cul4aQ3TCH7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cul4aQ3TCH7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cul4aQ3TCH7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cul4aQ3TCH7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Gm13241-201ENSMUST00000094493 780 ntBASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cul4aQ3TCH7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cul4aQ3TCH7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cul4aQ3TCH7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cul4aQ3TCH7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cul4aQ3TCH7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cul4aQ3TCH7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cul4aQ3TCH7 Gm27801-201ENSMUST00000184174 223 ntBASIC19.78■□□□□ 0.76
Cul4aQ3TCH7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cul4aQ3TCH7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cul4aQ3TCH7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cul4aQ3TCH7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cul4aQ3TCH7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cul4aQ3TCH7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cul4aQ3TCH7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cul4aQ3TCH7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cul4aQ3TCH7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.77■□□□□ 0.76
Cul4aQ3TCH7 Mir7075-201ENSMUST00000184187 82 ntBASIC19.77■□□□□ 0.76
Cul4aQ3TCH7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cul4aQ3TCH7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cul4aQ3TCH7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cul4aQ3TCH7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cul4aQ3TCH7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cul4aQ3TCH7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cul4aQ3TCH7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cul4aQ3TCH7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cul4aQ3TCH7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cul4aQ3TCH7 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.76■□□□□ 0.75
Cul4aQ3TCH7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cul4aQ3TCH7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cul4aQ3TCH7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cul4aQ3TCH7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.76■□□□□ 0.75
Cul4aQ3TCH7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cul4aQ3TCH7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cul4aQ3TCH7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cul4aQ3TCH7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cul4aQ3TCH7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cul4aQ3TCH7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cul4aQ3TCH7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cul4aQ3TCH7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cul4aQ3TCH7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Cul4aQ3TCH7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cul4aQ3TCH7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.75■□□□□ 0.75
Cul4aQ3TCH7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cul4aQ3TCH7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cul4aQ3TCH7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cul4aQ3TCH7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cul4aQ3TCH7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cul4aQ3TCH7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cul4aQ3TCH7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cul4aQ3TCH7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cul4aQ3TCH7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cul4aQ3TCH7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cul4aQ3TCH7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cul4aQ3TCH7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cul4aQ3TCH7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cul4aQ3TCH7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cul4aQ3TCH7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cul4aQ3TCH7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms