Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nhej1Q3KNJ2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.02■□□□□ 0.8
Nhej1Q3KNJ2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nhej1Q3KNJ2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nhej1Q3KNJ2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.02■□□□□ 0.8
Nhej1Q3KNJ2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nhej1Q3KNJ2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nhej1Q3KNJ2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nhej1Q3KNJ2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nhej1Q3KNJ2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.02■□□□□ 0.8
Nhej1Q3KNJ2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nhej1Q3KNJ2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nhej1Q3KNJ2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nhej1Q3KNJ2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nhej1Q3KNJ2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.02■□□□□ 0.79
Nhej1Q3KNJ2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nhej1Q3KNJ2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nhej1Q3KNJ2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nhej1Q3KNJ2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Nhej1Q3KNJ2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nhej1Q3KNJ2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Nhej1Q3KNJ2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Nhej1Q3KNJ2 Gm12251-201ENSMUST00000117893 792 ntBASIC20.01■□□□□ 0.79
Nhej1Q3KNJ2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.01■□□□□ 0.79
Nhej1Q3KNJ2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nhej1Q3KNJ2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Nhej1Q3KNJ2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nhej1Q3KNJ2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nhej1Q3KNJ2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nhej1Q3KNJ2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nhej1Q3KNJ2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nhej1Q3KNJ2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nhej1Q3KNJ2 Dmtn-210ENSMUST00000228824 2377 ntBASIC20■□□□□ 0.79
Nhej1Q3KNJ2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nhej1Q3KNJ2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20■□□□□ 0.79
Nhej1Q3KNJ2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nhej1Q3KNJ2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20■□□□□ 0.79
Nhej1Q3KNJ2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20■□□□□ 0.79
Nhej1Q3KNJ2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Nhej1Q3KNJ2 Gm5953-201ENSMUST00000220644 2616 ntBASIC20■□□□□ 0.79
Nhej1Q3KNJ2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nhej1Q3KNJ2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nhej1Q3KNJ2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20■□□□□ 0.79
Nhej1Q3KNJ2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nhej1Q3KNJ2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nhej1Q3KNJ2 Grk6-206ENSMUST00000224995 2971 ntBASIC19.98■□□□□ 0.79
Nhej1Q3KNJ2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.98■□□□□ 0.79
Nhej1Q3KNJ2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Nhej1Q3KNJ2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nhej1Q3KNJ2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nhej1Q3KNJ2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nhej1Q3KNJ2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.98■□□□□ 0.79
Nhej1Q3KNJ2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nhej1Q3KNJ2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nhej1Q3KNJ2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nhej1Q3KNJ2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nhej1Q3KNJ2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nhej1Q3KNJ2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Nhej1Q3KNJ2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nhej1Q3KNJ2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nhej1Q3KNJ2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nhej1Q3KNJ2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nhej1Q3KNJ2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nhej1Q3KNJ2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms