Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdx4Q07424 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.52□□□□□ -0.08
Cdx4Q07424 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdx4Q07424 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdx4Q07424 Gm42778-201ENSMUST00000199644 553 ntBASIC14.52□□□□□ -0.09
Cdx4Q07424 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdx4Q07424 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdx4Q07424 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.52□□□□□ -0.09
Cdx4Q07424 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.52□□□□□ -0.09
Cdx4Q07424 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cdx4Q07424 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.51□□□□□ -0.09
Cdx4Q07424 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
Cdx4Q07424 Gm42642-201ENSMUST00000200683 355 ntBASIC14.51□□□□□ -0.09
Cdx4Q07424 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.51□□□□□ -0.09
Cdx4Q07424 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 AA386476-201ENSMUST00000098781 1665 ntBASIC14.51□□□□□ -0.09
Cdx4Q07424 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx4Q07424 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cdx4Q07424 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx4Q07424 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdx4Q07424 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx4Q07424 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdx4Q07424 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.5□□□□□ -0.09
Cdx4Q07424 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx4Q07424 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cdx4Q07424 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.5□□□□□ -0.09
Cdx4Q07424 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.5□□□□□ -0.09
Cdx4Q07424 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.5□□□□□ -0.09
Cdx4Q07424 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdx4Q07424 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Cdx4Q07424 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx4Q07424 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx4Q07424 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx4Q07424 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx4Q07424 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx4Q07424 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx4Q07424 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx4Q07424 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.49□□□□□ -0.09
Cdx4Q07424 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cdx4Q07424 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx4Q07424 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx4Q07424 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cdx4Q07424 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx4Q07424 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx4Q07424 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx4Q07424 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx4Q07424 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cdx4Q07424 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
Cdx4Q07424 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx4Q07424 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx4Q07424 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cdx4Q07424 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.48□□□□□ -0.09
Cdx4Q07424 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx4Q07424 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx4Q07424 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx4Q07424 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx4Q07424 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx4Q07424 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx4Q07424 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.47□□□□□ -0.09
Cdx4Q07424 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.47□□□□□ -0.09
Cdx4Q07424 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx4Q07424 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms