Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SgcbP82349 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.79■□□□□ 0.28
SgcbP82349 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcbP82349 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcbP82349 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SgcbP82349 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SgcbP82349 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.78■□□□□ 0.28
SgcbP82349 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.78■□□□□ 0.28
SgcbP82349 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.78■□□□□ 0.28
SgcbP82349 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SgcbP82349 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.78■□□□□ 0.28
SgcbP82349 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SgcbP82349 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SgcbP82349 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SgcbP82349 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
SgcbP82349 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SgcbP82349 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SgcbP82349 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SgcbP82349 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.77■□□□□ 0.27
SgcbP82349 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SgcbP82349 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SgcbP82349 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SgcbP82349 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SgcbP82349 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SgcbP82349 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SgcbP82349 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SgcbP82349 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SgcbP82349 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SgcbP82349 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SgcbP82349 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SgcbP82349 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgcbP82349 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.75■□□□□ 0.27
SgcbP82349 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgcbP82349 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgcbP82349 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgcbP82349 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgcbP82349 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.75■□□□□ 0.27
SgcbP82349 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.75■□□□□ 0.27
SgcbP82349 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SgcbP82349 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SgcbP82349 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgcbP82349 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SgcbP82349 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgcbP82349 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SgcbP82349 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SgcbP82349 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgcbP82349 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgcbP82349 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgcbP82349 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.74■□□□□ 0.27
SgcbP82349 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.74■□□□□ 0.27
SgcbP82349 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SgcbP82349 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgcbP82349 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgcbP82349 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgcbP82349 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgcbP82349 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SgcbP82349 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
SgcbP82349 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgcbP82349 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SgcbP82349 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SgcbP82349 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcbP82349 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SgcbP82349 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.73■□□□□ 0.27
SgcbP82349 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.73■□□□□ 0.27
SgcbP82349 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcbP82349 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.73■□□□□ 0.27
SgcbP82349 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcbP82349 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcbP82349 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcbP82349 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcbP82349 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SgcbP82349 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SgcbP82349 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.72■□□□□ 0.27
SgcbP82349 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms