Protein–RNA interactions for Protein: P70671

Irf3, Interferon regulatory factor 3, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf3P70671 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.55■□□□□ 0.88
Irf3P70671 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf3P70671 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf3P70671 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.55■□□□□ 0.88
Irf3P70671 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf3P70671 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.55■□□□□ 0.88
Irf3P70671 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Irf3P70671 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf3P70671 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf3P70671 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf3P70671 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf3P70671 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf3P70671 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf3P70671 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Irf3P70671 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf3P70671 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf3P70671 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.54■□□□□ 0.88
Irf3P70671 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.54■□□□□ 0.88
Irf3P70671 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf3P70671 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf3P70671 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf3P70671 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Irf3P70671 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Irf3P70671 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf3P70671 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.53■□□□□ 0.88
Irf3P70671 Gm10653-202ENSMUST00000139570 835 ntBASIC20.53■□□□□ 0.88
Irf3P70671 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.53■□□□□ 0.88
Irf3P70671 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Irf3P70671 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.53■□□□□ 0.88
Irf3P70671 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Irf3P70671 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Irf3P70671 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.53■□□□□ 0.88
Irf3P70671 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf3P70671 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.53■□□□□ 0.88
Irf3P70671 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf3P70671 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Irf3P70671 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf3P70671 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Irf3P70671 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Irf3P70671 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf3P70671 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Irf3P70671 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
Irf3P70671 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.52■□□□□ 0.88
Irf3P70671 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.52■□□□□ 0.88
Irf3P70671 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Irf3P70671 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Irf3P70671 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Irf3P70671 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf3P70671 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf3P70671 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf3P70671 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Irf3P70671 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.51■□□□□ 0.87
Irf3P70671 Gm20760-201ENSMUST00000179197 648 ntBASIC20.51■□□□□ 0.87
Irf3P70671 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf3P70671 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf3P70671 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf3P70671 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf3P70671 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf3P70671 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf3P70671 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf3P70671 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Irf3P70671 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Irf3P70671 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Irf3P70671 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Irf3P70671 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf3P70671 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf3P70671 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf3P70671 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf3P70671 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf3P70671 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Irf3P70671 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Irf3P70671 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf3P70671 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf3P70671 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Irf3P70671 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Irf3P70671 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Irf3P70671 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf3P70671 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf3P70671 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.49■□□□□ 0.87
Irf3P70671 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Irf3P70671 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Irf3P70671 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf3P70671 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.48■□□□□ 0.87
Irf3P70671 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Irf3P70671 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.48■□□□□ 0.87
Irf3P70671 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Irf3P70671 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf3P70671 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf3P70671 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf3P70671 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf3P70671 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Irf3P70671 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Irf3P70671 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Irf3P70671 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf3P70671 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Irf3P70671 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf3P70671 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf3P70671 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Irf3P70671 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
Irf3P70671 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms