Protein–RNA interactions for Protein: P70343

Casp4, Caspase-4, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp4P70343 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp4P70343 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp4P70343 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.65■□□□□ 0.74
Casp4P70343 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp4P70343 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp4P70343 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp4P70343 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp4P70343 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Casp4P70343 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Casp4P70343 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Casp4P70343 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Casp4P70343 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp4P70343 Gm10493-201ENSMUST00000097270 612 ntBASIC19.64■□□□□ 0.73
Casp4P70343 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp4P70343 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp4P70343 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.64■□□□□ 0.73
Casp4P70343 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp4P70343 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp4P70343 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Casp4P70343 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp4P70343 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp4P70343 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.64■□□□□ 0.73
Casp4P70343 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Casp4P70343 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casp4P70343 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casp4P70343 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.63■□□□□ 0.73
Casp4P70343 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casp4P70343 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casp4P70343 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.63■□□□□ 0.73
Casp4P70343 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casp4P70343 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casp4P70343 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.63■□□□□ 0.73
Casp4P70343 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Casp4P70343 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casp4P70343 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.63■□□□□ 0.73
Casp4P70343 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.63■□□□□ 0.73
Casp4P70343 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.63■□□□□ 0.73
Casp4P70343 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.63■□□□□ 0.73
Casp4P70343 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casp4P70343 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casp4P70343 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Casp4P70343 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casp4P70343 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Casp4P70343 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.62■□□□□ 0.73
Casp4P70343 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casp4P70343 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casp4P70343 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casp4P70343 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casp4P70343 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casp4P70343 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casp4P70343 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casp4P70343 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Casp4P70343 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.62■□□□□ 0.73
Casp4P70343 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Casp4P70343 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casp4P70343 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casp4P70343 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Casp4P70343 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casp4P70343 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casp4P70343 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.61■□□□□ 0.73
Casp4P70343 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.61■□□□□ 0.73
Casp4P70343 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casp4P70343 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Casp4P70343 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casp4P70343 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casp4P70343 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Casp4P70343 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Casp4P70343 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casp4P70343 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casp4P70343 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Casp4P70343 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Casp4P70343 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.6■□□□□ 0.73
Casp4P70343 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.6■□□□□ 0.73
Casp4P70343 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Casp4P70343 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casp4P70343 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Casp4P70343 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casp4P70343 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.6■□□□□ 0.73
Casp4P70343 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Casp4P70343 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casp4P70343 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casp4P70343 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Casp4P70343 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.59■□□□□ 0.73
Casp4P70343 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casp4P70343 Gm27801-201ENSMUST00000184174 223 ntBASIC19.59■□□□□ 0.73
Casp4P70343 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Casp4P70343 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Casp4P70343 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casp4P70343 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Casp4P70343 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Casp4P70343 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.59■□□□□ 0.73
Casp4P70343 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
Casp4P70343 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.58■□□□□ 0.73
Casp4P70343 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Casp4P70343 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Casp4P70343 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Casp4P70343 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casp4P70343 Gm9988-201ENSMUST00000069786 435 ntBASIC19.58■□□□□ 0.72
Casp4P70343 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Casp4P70343 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 139.3 ms