Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lhx1P63006 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.51■□□□□ 0.55
Lhx1P63006 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lhx1P63006 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.51■□□□□ 0.55
Lhx1P63006 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lhx1P63006 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx1P63006 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx1P63006 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx1P63006 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx1P63006 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx1P63006 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx1P63006 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.5■□□□□ 0.55
Lhx1P63006 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.5■□□□□ 0.55
Lhx1P63006 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx1P63006 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx1P63006 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx1P63006 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx1P63006 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx1P63006 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx1P63006 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Lhx1P63006 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx1P63006 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx1P63006 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx1P63006 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx1P63006 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Lhx1P63006 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx1P63006 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx1P63006 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.49■□□□□ 0.55
Lhx1P63006 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx1P63006 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Lhx1P63006 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.49■□□□□ 0.55
Lhx1P63006 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Lhx1P63006 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx1P63006 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx1P63006 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx1P63006 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx1P63006 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Lhx1P63006 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Lhx1P63006 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx1P63006 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx1P63006 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Lhx1P63006 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lhx1P63006 Gm13148-201ENSMUST00000118892 745 ntBASIC18.48■□□□□ 0.55
Lhx1P63006 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lhx1P63006 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lhx1P63006 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lhx1P63006 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lhx1P63006 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lhx1P63006 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx1P63006 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.47■□□□□ 0.55
Lhx1P63006 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx1P63006 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx1P63006 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.47■□□□□ 0.55
Lhx1P63006 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx1P63006 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.47■□□□□ 0.55
Lhx1P63006 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.47■□□□□ 0.55
Lhx1P63006 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx1P63006 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx1P63006 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx1P63006 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx1P63006 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Lhx1P63006 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx1P63006 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lhx1P63006 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lhx1P63006 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lhx1P63006 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lhx1P63006 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Lhx1P63006 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.46■□□□□ 0.55
Lhx1P63006 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lhx1P63006 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lhx1P63006 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Lhx1P63006 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx1P63006 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx1P63006 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx1P63006 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Lhx1P63006 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Lhx1P63006 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.45■□□□□ 0.54
Lhx1P63006 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Lhx1P63006 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.45■□□□□ 0.54
Lhx1P63006 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Lhx1P63006 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Lhx1P63006 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx1P63006 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx1P63006 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Lhx1P63006 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Lhx1P63006 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Lhx1P63006 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lhx1P63006 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lhx1P63006 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Lhx1P63006 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.44■□□□□ 0.54
Lhx1P63006 Gm5408-201ENSMUST00000197998 747 ntBASIC18.44■□□□□ 0.54
Lhx1P63006 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.44■□□□□ 0.54
Lhx1P63006 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lhx1P63006 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lhx1P63006 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Lhx1P63006 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lhx1P63006 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lhx1P63006 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx1P63006 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Lhx1P63006 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms