Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.84■□□□□ 0.13
Cpne2P59108 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.84■□□□□ 0.13
Cpne2P59108 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.84■□□□□ 0.13
Cpne2P59108 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cpne2P59108 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cpne2P59108 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne2P59108 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.83■□□□□ 0.13
Cpne2P59108 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cpne2P59108 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Cpne2P59108 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne2P59108 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cpne2P59108 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cpne2P59108 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cpne2P59108 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne2P59108 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Cpne2P59108 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
Cpne2P59108 Rps24-207ENSMUST00000224568 714 ntBASIC15.83■□□□□ 0.12
Cpne2P59108 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne2P59108 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne2P59108 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne2P59108 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne2P59108 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne2P59108 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne2P59108 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne2P59108 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.83■□□□□ 0.12
Cpne2P59108 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne2P59108 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne2P59108 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne2P59108 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cpne2P59108 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne2P59108 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne2P59108 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne2P59108 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne2P59108 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.82■□□□□ 0.12
Cpne2P59108 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cpne2P59108 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne2P59108 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne2P59108 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne2P59108 Gm14117-201ENSMUST00000122417 843 ntBASIC15.81■□□□□ 0.12
Cpne2P59108 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne2P59108 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Cpne2P59108 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cpne2P59108 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne2P59108 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cpne2P59108 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne2P59108 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.8■□□□□ 0.12
Cpne2P59108 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Cpne2P59108 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne2P59108 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne2P59108 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne2P59108 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne2P59108 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne2P59108 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.8■□□□□ 0.12
Cpne2P59108 Gm45102-201ENSMUST00000207427 857 ntBASIC15.8■□□□□ 0.12
Cpne2P59108 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne2P59108 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cpne2P59108 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne2P59108 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne2P59108 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne2P59108 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne2P59108 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne2P59108 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne2P59108 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne2P59108 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne2P59108 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.79■□□□□ 0.12
Cpne2P59108 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne2P59108 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.79■□□□□ 0.12
Cpne2P59108 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.79■□□□□ 0.12
Cpne2P59108 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.79■□□□□ 0.12
Cpne2P59108 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne2P59108 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne2P59108 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne2P59108 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne2P59108 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne2P59108 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne2P59108 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne2P59108 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cpne2P59108 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.78■□□□□ 0.12
Cpne2P59108 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne2P59108 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne2P59108 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne2P59108 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.78■□□□□ 0.12
Cpne2P59108 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.78■□□□□ 0.12
Cpne2P59108 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne2P59108 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms